Pre_GI Gene

Host: NC_011001:302500 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011001:302500 Burkholderia cenocepacia J2315 chromosome 2, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
303100303495396putative transposaseQuickGO ontologyBLASTP
303492303839348putative transposaseQuickGO ontologyBLASTP
3038913054621572putative transposaseQuickGO ontologyBLASTP
3060463076351590putative AMP-binding proteinQuickGO ontologyBLASTP
307702308637936putative 3-oxoacyl-acyl-carrier-protein synthaseQuickGO ontologyBLASTP
3086343096591026putative 3-oxoacyl-acyl-carrier-protein synthaseQuickGO ontologyBLASTP
309643309921279putative acyl carrier proteinQuickGO ontologyBLASTP
3099523112081257putative acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
311448312281834epidemic strain marker regulatorQuickGO ontologyBLASTP
312675312956282putative transcriptional regulatorQuickGO ontology
312973313272300repressor proteinQuickGO ontologyBLASTP
313367313702336putative repressor proteinQuickGO ontologyBLASTP
313884314672789putative amino acid transporterQuickGO ontologyBLASTP
3147633158361074putative branched-chain amino acid transporterQuickGO ontologyBLASTP
315836316570735ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
316557317312756ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
3173093184871179hypothetical proteinBLASTP
3185403199551416putative amidaseQuickGO ontologyBLASTP
319952320497546hypothetical proteinBLASTP
3205503215841035putative porinQuickGO ontologyBLASTP
321591321815225hypothetical proteinBLASTP
3221243234731350hypothetical protein
323992324261270hypothetical proteinBLASTP
324258324746489putative acetyltransferaseQuickGO ontologyBLASTP
3247613258191059BLASTP
326635327486852hypothetical proteinBLASTP
328358328813456hypothetical proteinBLASTP
329025329495471putative universal stress proteinQuickGO ontologyBLASTP
329613329888276hypothetical proteinBLASTP
330064330498435putative heat shock proteinQuickGO ontologyBLASTP
330593331258666hypothetical proteinBLASTP
331489332139651putative phospholipid-binding proteinQuickGO ontologyBLASTP
332176332379204hypothetical protein
3324713342281758putative sulfate transporter family proteinQuickGO ontologyBLASTP