Pre_GI Gene

Host: NC_011083:2847318 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011083:2847318 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
284731828487271410type I secretion outer membrane protein TolC familyQuickGO ontologyBLASTP
284872428509042181protein secretion ABC efflux system permease and ATP-binding proteinQuickGO ontologyBLASTP
285088528520751191type I secretion membrane fusion protein HlyD familyQuickGO ontologyBLASTP
285267628537401065BLASTP
28537542853921168BLASTP
28539232854561639hypothetical proteinBLASTP
285500528561441140putative cytoplasmic proteinQuickGO ontologyBLASTP
28564792857291813putative cytoplasmic proteinQuickGO ontologyBLASTP
28577572857972216putative cytoplasmic proteinQuickGO ontologyBLASTP
285800828600772070putative inner membrane proteinQuickGO ontologyBLASTP
28601972860322126hypothetical proteinBLASTP
286058028618631284putative ATPaseQuickGO ontologyBLASTP
28618602862726867putative cytoplasmic proteinQuickGO ontologyBLASTP
28627232862863141hypothetical proteinBLASTP
28628792863169291transcriptional regulator XRE familyQuickGO ontologyBLASTP
28633302863614285regulator for maltose metabolismQuickGO ontologyBLASTP
28637272864248522glucitolsorbitol permease iic componentQuickGO ontologyBLASTP
28642482864619372putative glucitol-specific PTS enzyme IIIQuickGO ontologyBLASTP
28646162865596981glucitolsorbitol-specific phosphotransferase enzyme iib componentQuickGO ontologyBLASTP
286560728666201014putative dehydrogenaseQuickGO ontologyBLASTP
286691528681171203putative hexulose 6 phosphate synthaseQuickGO ontologyBLASTP
286819128688266363-hexulose-6-phosphate synthaseQuickGO ontologyBLASTP
286885028694165676-phospho 3-hexuloisomeraseQuickGO ontologyBLASTP
28694132870255843putative cytoplasmic proteinQuickGO ontologyBLASTP
287038528719261542pts system glucose-specific iibc componentQuickGO ontologyBLASTP
287214928738281680putative dipeptideoligopeptidenickel ABC-type transport system periplasmic componentQuickGO ontologyBLASTP
28739072874020114hypothetical proteinBLASTP
28745862874699114hypothetical protein
28749452875820876DNA-binding prophage proteinQuickGO ontologyBLASTP
287598628778601875putative inner membrane proteinQuickGO ontologyBLASTP
287812028794421323putative inner membrane proteinQuickGO ontologyBLASTP
28796402879795156hypothetical proteinBLASTP
28807272880861135BLASTP
28809582881425468BLASTP
28815722881838267transposase subfamilyQuickGO ontologyBLASTP
288292628849081983putative DNARNA helicaseQuickGO ontologyBLASTP
28851872885486300IS3 transposase orfAQuickGO ontologyBLASTP
28854832886349867transposase InsF for insertion sequence IS3ABCDEfAQuickGO ontologyBLASTP
28871292887599471repressor of phase 1 flagellin geneQuickGO ontologyBLASTP
288773628892561521flagellinQuickGO ontologyBLASTP
28896302890193564DNA-invertase hinQuickGO ontologyBLASTP
289088428919991116IroBQuickGO ontologyBLASTP
289208028957363657ATP binding cassetteQuickGO ontologyBLASTP
289584628970901245enterochelin esteraseQuickGO ontologyBLASTP
28971222898057936IroEQuickGO ontologyBLASTP
289809929002732175TonB dependent outer membrane siderophore receptor proteinQuickGO ontologyBLASTP
29007262900863138BLASTP
290131229024121101effector protein pipB2QuickGO ontologyBLASTP
29028832903812930virulence proteinQuickGO ontologyBLASTP
29039122904109198hypothetical proteinBLASTP
29041062905002897Mig-14QuickGO ontologyBLASTP
29050812905233153hypothetical proteinBLASTP
29053712905502132hypothetical proteinBLASTP
29055182905631114putative inner membrane proteinQuickGO ontologyBLASTP
290572429067371014high-affinity nickel transport proteinQuickGO ontologyBLASTP
290687029082851416tricarboxylic transport regulatory proteinQuickGO ontologyBLASTP
29082722908946675transcriptional regulatory protein TctDQuickGO ontologyBLASTP
29091012910078978tricarboxylic transportQuickGO ontologyBLASTP
29100932910524432tricarboxylic transportQuickGO ontologyBLASTP
291053529120491515tricarboxylic transportQuickGO ontologyBLASTP
29122132912326114hypothetical proteinBLASTP
29123522913329978BLASTP
291335529146231269putative FAD dependent oxidoreductaseQuickGO ontologyBLASTP
291464529160931449succinate-semialdehyde dehydrogenase NADPQuickGO ontologyBLASTP
2916108291739112844-aminobutyrate transaminaseQuickGO ontologyBLASTP