Pre_GI Gene

Host: NC_011094:1282385 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011094:1282385 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12823851283059675DNA-binding transcriptional regulator PhoPQuickGO ontologyBLASTP
128318312845531371adenylosuccinate lyaseQuickGO ontologyBLASTP
12845571285204648hypothetical proteinBLASTP
128528512863911107tRNA-specific 2-thiouridylase MnmAQuickGO ontologyBLASTP
12864451286906462NUDIX family hydrolaseQuickGO ontologyBLASTP
12869181287247330hypothetical proteinBLASTP
12872441287981738ribosomal large subunit pseudouridine synthase EQuickGO ontologyBLASTP
128808112893311251isocitrate dehydrogenaseQuickGO ontologyBLASTP
12894951289623129hypothetical proteinBLASTP
128977712909011125bacteriophage proteinQuickGO ontologyBLASTP
12911741291335162hypothetical proteinBLASTP
12923781293106729pertussis toxin subunit 1 subfamily proteinQuickGO ontologyBLASTP
12932991293841543hypothetical proteinBLASTP
12939891294366378hypothetical proteinBLASTP
12944391295248810cytolethal distending toxin BQuickGO ontologyBLASTP
12957461295910165transposaseQuickGO ontologyBLASTP
12961211296360240hypothetical proteinBLASTP
12965511297072522EnvEQuickGO ontologyBLASTP
12974891297701213hypothetical proteinBLASTP
12978331298096264virulence protein PagDQuickGO ontologyBLASTP
12981451298336192hypothetical proteinBLASTP
12983951298523129hypothetical proteinBLASTP
12989031299460558outer membrane invasion proteinQuickGO ontologyBLASTP
13006971301041345lysozyme inhibitorQuickGO ontologyBLASTP
13014191301544126hypothetical proteinBLASTP
13016881301861174hypothetical proteinBLASTP
13021781302648471heat shock proteinQuickGO ontologyBLASTP
130298713040301044hypothetical proteinBLASTP
13041131304643531cytochrome B561QuickGO ontologyBLASTP
13047921305106315hypothetical proteinBLASTP
13051981305356159hypothetical proteinBLASTP
13055021305642141hypothetical proteinBLASTP
130578813074221635nickel ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
13074221308396975dipeptideoligopeptidenickel ABC transporter permeaseQuickGO ontologyBLASTP
13083861309198813nickeldi-oligopepetide ABC transporter permease subunitQuickGO ontologyBLASTP
13091921309989798nickeldi-oligopepetide ABC transporter ATP binding subunitQuickGO ontologyBLASTP
13099831310573591ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
131065513117881134mechanosensitive ion channel protein MscSQuickGO ontologyBLASTP
13119821312308327ferredoxinQuickGO ontologyBLASTP
13125021313152651hypothetical proteinBLASTP
13131801314049870aminoglycoside resistance proteinQuickGO ontologyBLASTP