Pre_GI Gene

Host: NC_011094:2791719 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011094:2791719 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
279171927931281410type I secretion outer membrane protein TolC family proteinQuickGO ontologyBLASTP
279312527953052181protein secretion ABC efflux system permease and ATP-binding proteinQuickGO ontologyBLASTP
279528627964761191type I secretion membrane fusion protein HlyD family proteinQuickGO ontologyBLASTP
279703427983051272phage integrase family proteinQuickGO ontologyBLASTP
279897528003181344hypothetical protein
280094028047583819hypothetical proteinBLASTP
28058372805980144hypothetical protein
28064132807360948hypothetical proteinBLASTP
28077542807978225hypothetical proteinBLASTP
280797528092161242relaxasemobilization nuclease domain-containing proteinQuickGO ontologyBLASTP
28093972809669273hypothetical proteinBLASTP
28097112810097387hypothetical proteinBLASTP
28101272810447321hypothetical proteinBLASTP
28106012811023423hypothetical proteinBLASTP
28117752811900126hypothetical protein
28119472812510564hypothetical proteinBLASTP
28125342812911378hypothetical protein
28130372813345309hypothetical proteinBLASTP
28133612813570210hypothetical proteinBLASTP
28136932814544852hypothetical proteinBLASTP
281488528161591275phage-related reverse transcriptasematurase family proteinQuickGO ontologyBLASTP
281615028181622013hypothetical proteinBLASTP
28197422820281540repressor of phase 1 flagellin geneQuickGO ontologyBLASTP
282034928218691521flagellinQuickGO ontologyBLASTP
28219612822533573DNA-invertase hinQuickGO ontologyBLASTP
28232092823391183hypothetical proteinBLASTP
282349628246111116protein IroBQuickGO ontologyBLASTP
282469228283483657ATP-binding proteinQuickGO ontologyBLASTP
282845828297021245enterochelin esteraseQuickGO ontologyBLASTP
28297342830669936IroEQuickGO ontologyBLASTP
283071128328852175outer membrane receptor FepAQuickGO ontologyBLASTP
283392928350291101effector protein pipB2QuickGO ontologyBLASTP
28354992836428930hypothetical proteinBLASTP
28365282836725198hypothetical proteinBLASTP
28367222837618897hypothetical proteinBLASTP
28381342838247114hypothetical proteinBLASTP
283834028393531014high-affinity nickel transport proteinQuickGO ontologyBLASTP
283948628409011416tricarboxylic transport regulatory proteinQuickGO ontologyBLASTP
28408882841562675transcriptional regulatory protein TctDQuickGO ontologyBLASTP
28416012841720120hypothetical proteinBLASTP
28417172842694978tricarboxylic transportQuickGO ontologyBLASTP
28427092843140432tricarboxylic transportQuickGO ontologyBLASTP
284315128446651515hypothetical proteinBLASTP
28449672845944978hypothetical proteinBLASTP
284597028472381269hydroxyglutarate oxidaseQuickGO ontologyBLASTP
2848722285000512844-aminobutyrate aminotransferaseQuickGO ontologyBLASTP