Pre_GI Gene

Host: NC_011149:1870931 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011149:1870931 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
18701401870937798ABC nickeldi-oligopepetide transporter ATP binding subunitQuickGO ontologyBLASTP
18709311871743813ABC nickeldi-oligopepetide transporter permease subunitQuickGO ontologyBLASTP
18717331872707975ABC-type dipeptideoligopeptidenickel transporter permease componentQuickGO ontologyBLASTP
187270718743411635nickel ABC transporter periplasmic nickel-binding proteinQuickGO ontologyBLASTP
18745091874634126hypothetical protein
18750231875337315hypothetical proteinBLASTP
18754861876016531nickel-dependent hydrogenase B-type cytochrome subunitQuickGO ontologyBLASTP
187609918771421044putative cytoplasmic proteinQuickGO ontologyBLASTP
18774811877951471heat shock proteinQuickGO ontologyBLASTP
18782681878441174hypothetical proteinBLASTP
18785731878698126hypothetical proteinBLASTP
18790761879420345putative periplasmic proteinQuickGO ontologyBLASTP
18806561881213558virulence membrane protein PagCQuickGO ontologyBLASTP
18815941881722129hypothetical proteinBLASTP
18817811881972192hypothetical proteinBLASTP
18820211882284264virulence protein PagDQuickGO ontologyBLASTP
18830461883567522EnvEQuickGO ontologyBLASTP
18837581883997240hypothetical proteinBLASTP
18844861885274789EnvFQuickGO ontologyBLASTP
18855961885802207BLASTP
18865051886654150putative inner membrane proteinQuickGO ontologyBLASTP
188692518880491125putative bacteriophage proteinQuickGO ontologyBLASTP
188850718897571251isocitrate dehydrogenase NADP-dependentQuickGO ontologyBLASTP
18898571890594738ribosomal large subunit pseudouridine synthase EQuickGO ontologyBLASTP
18905911890920330putative secreted proteinQuickGO ontologyBLASTP
18909321891393462hydrolase NUDIX familyQuickGO ontologyBLASTP
189144718925531107tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferaseQuickGO ontologyBLASTP
18926401893281642hypothetical proteinBLASTP
189328518946551371adenylosuccinate lyaseQuickGO ontologyBLASTP
18947791895453675transcriptional regulatory protein PhoPQuickGO ontologyBLASTP
189545318969161464sensor protein PhoQQuickGO ontologyBLASTP
189699718981181122cupin family proteinQuickGO ontologyBLASTP
189815818994921335putative periplasmic proteinQuickGO ontologyBLASTP
189949619007251230peptidase TQuickGO ontologyBLASTP