Pre_GI Gene

Host: NC_011149:1987291 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011149:1987291 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
19872911988028738putative hydrolaseQuickGO ontologyBLASTP
19881131989051939putative 2-hydroxyacid dehydrogenase YcdWQuickGO ontologyBLASTP
19890501989214165hypothetical proteinBLASTP
19894751989876402ISPsy11 transposase OrfAQuickGO ontologyBLASTP
19901251990730606integrase catalytic regionQuickGO ontologyBLASTP
19915431991692150transposaseQuickGO ontologyBLASTP
19918851992013129BLASTP
19920101992900891BLASTP
19933621994180819hypothetical proteinBLASTP
19946251994744120hypothetical protein
1995197199528892tRNA-SerQuickGO ontologyBLASTP
19953761996173798hypothetical proteinBLASTP
199652919978031275integraseQuickGO ontologyBLASTP
199865219997881137hypothetical proteinBLASTP
19997922000781990RelA SpoT domain proteinQuickGO ontologyBLASTP
200132020027561437prepilin-type N- cleavagemethylation domain proteinQuickGO ontologyBLASTP
20028092003366558putative type IV pilin proteinQuickGO ontologyBLASTP
20037732004078306hypothetical proteinBLASTP
200472220062271506MobAMobL familyQuickGO ontologyBLASTP
200628120075641284hypothetical proteinBLASTP
20077012007976276hypothetical proteinBLASTP
20079872008517531hypothetical proteinBLASTP
20085722008715144hypothetical proteinBLASTP
20089492009422474hypothetical proteinBLASTP
20094612009838378hypothetical proteinBLASTP
20100432010543501hypothetical protein
20105472010672126hypothetical protein
20109022011216315pentatricopeptideQuickGO ontologyBLASTP
20116862011955270BLASTP
20120282012180153hypothetical protein
20127922012917126hypothetical protein
20132902014024735putative DNA-binding proteinQuickGO ontologyBLASTP
20140522014852801hypothetical proteinBLASTP
20149312015413483hypothetical proteinBLASTP
20154622015758297BLASTP
20158112016101291hypothetical proteinBLASTP
20161832016401219hypothetical proteinBLASTP
20165522017397846hypothetical proteinBLASTP
20173812017530150hypothetical protein
20179702018278309integraseQuickGO ontologyBLASTP
20184422019314873DNA-binding prophage proteinQuickGO ontologyBLASTP
20195242020318795hypothetical proteinBLASTP
202053120224921962tetratricopeptide repeat TPR-containing proteinQuickGO ontologyBLASTP
202261920264793861hypothetical proteinBLASTP
20269632027253291BLASTP
20279012028425525putative endoproteaseQuickGO ontologyBLASTP
20284222028604183hypothetical protein
20299182030073156transposaseQuickGO ontologyBLASTP
203028120324492169tetratricopeptide repeat proteinQuickGO ontologyBLASTP
203250620342361731putative periplasmic proteinQuickGO ontologyBLASTP