Pre_GI Gene

Host: NC_011149:3822000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011149:3822000 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
382225238232771026L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
3823287382448311972-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
38246863825618933ADP-glyceromanno-heptose 6-epimeraseQuickGO ontologyBLASTP
382562138266671047lipopolysaccharide heptosyltransferase IIQuickGO ontologyBLASTP
38266673827620954lipopolysaccharide heptosyltransferase IQuickGO ontologyBLASTP
382766038288741215O-antigen ligaseQuickGO ontologyBLASTP
382893038300751146lipopolysaccharide 12-N-acetylglucosaminetransferaseQuickGO ontologyBLASTP
38301753830984810lipopolysaccharide core biosynthesis protein RfaZQuickGO ontologyBLASTP
38311343831832699lipopolysaccharide core biosynthesis protein RfaYQuickGO ontologyBLASTP
383185538328651011lipopolysaccharide 12-glucosyltransferaseQuickGO ontologyBLASTP
383288338338961014lipopolysaccharide 13-galactosyltransferaseQuickGO ontologyBLASTP
383390238349811080lipopolysaccharide 16-galactosyltransferaseQuickGO ontologyBLASTP
38353153836112798lipopolysaccharide core biosynthesis protein RfaPQuickGO ontologyBLASTP
383610538372291125lipopolysaccharide core biosynthesis protein RfaGQuickGO ontologyBLASTP
383722638382961071putative lipopolysaccharide heptosyltransferase IIIQuickGO ontologyBLASTP
3838705383998212783-deoxy-D-manno-octulosonic-acid transferaseQuickGO ontologyBLASTP
38399913840470480pantetheine-phosphate adenylyltransferaseQuickGO ontologyBLASTP
38404983841307810formamidopyrimidine-DNA glycosylaseQuickGO ontologyBLASTP
38414053841572168ribosomal protein L33QuickGO ontologyBLASTP
38415933841829237ribosomal protein L28QuickGO ontologyBLASTP
38420473842712666DNA repair protein RadCQuickGO ontologyBLASTP
384288538441081224BLASTP
38440863844544459dUTP diphosphataseQuickGO ontologyBLASTP
38446523845248597transcriptional regulator domain protein TetR familyQuickGO ontologyBLASTP
38453263845967642orotate phosphoribosyltransferaseQuickGO ontologyBLASTP
38460463846762717ribonuclease PHQuickGO ontologyBLASTP