Pre_GI Gene

Host: NC_011205:2180598 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011205:2180598 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
21803632180608246hypothetical protein
21805982181161564hypothetical proteinBLASTP
21811602181516357hypothetical proteinBLASTP
21815742182401828hypothetical proteinBLASTP
21825382183077540hypothetical proteinBLASTP
21831482183885738hypothetical proteinBLASTP
21838822184358477DNA N-4 cytosine methyltransferase MNgoMXVQuickGO ontologyBLASTP
21843622185111750hypothetical proteinBLASTP
21851082185677570endodeoxyribonucleaseQuickGO ontologyBLASTP
21857172185944228hypothetical proteinBLASTP
21859462186935990integrase proteinQuickGO ontologyBLASTP
2187048218713992tRNA-SerQuickGO ontology
21872272188024798hypothetical proteinBLASTP
218838021896541275integraseQuickGO ontologyBLASTP
21897262189977252hypothetical proteinBLASTP
21904562190953498hypothetical proteinBLASTP
21913152191878564hypothetical proteinBLASTP
21919452192058114hypothetical proteinBLASTP
21922892193170882TIR proteinQuickGO ontologyBLASTP
219374421955821839pilinQuickGO ontologyBLASTP
21955982196155558type IV pilin proteinQuickGO ontologyBLASTP
21965632196868306hypothetical proteinBLASTP
219750521990251521MobAMobL family proteinQuickGO ontologyBLASTP
21990492199939891hypothetical proteinBLASTP
22001252200304180hypothetical proteinBLASTP
22003992200929531hypothetical proteinBLASTP
22010172201154138hypothetical proteinBLASTP
22013642201837474hypothetical proteinBLASTP
22020802202247168hypothetical proteinBLASTP
220232522039351611hypothetical proteinBLASTP
22039872204949963hypothetical proteinBLASTP
22051892205329141hypothetical protein
22054762205745270BLASTP
22057072205847141hypothetical proteinBLASTP
22071052207839735DNA-binding proteinQuickGO ontologyBLASTP
22078672208658792hypothetical proteinBLASTP
22090412209223183hypothetical proteinBLASTP
22093842209788405H-NS histone family proteinQuickGO ontologyBLASTP
22098912210022132hypothetical protein
221081722120881272hypothetical proteinBLASTP
22123342212630297BLASTP
22126752212965291hypothetical proteinBLASTP
22130472213265219hypothetical proteinBLASTP
22134162214291876hypothetical proteinBLASTP
22148342215358525endoproteaseQuickGO ontologyBLASTP
22154072215532126hypothetical protein
22159932216529537BLASTP
221687222190402169tetratricopeptide repeat proteinQuickGO ontologyBLASTP
221909722208271731hypothetical proteinBLASTP
22208582220992135hypothetical proteinBLASTP
22210372221210174hypothetical proteinBLASTP
22213022221451150hypothetical proteinBLASTP
222173222231861455AMP nucleosidaseQuickGO ontologyBLASTP
22232712223393123hypothetical proteinBLASTP
22233822223708327hypothetical proteinBLASTP
222480122263271527BLASTP