Pre_GI Gene

Host: NC_011593:2288993 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011593:2288993 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
228899322901651173hypothetical proteinBLASTP
22904812290894414glycine cleavage system H proteinQuickGO ontologyBLASTP
229092022922121293NUDIX hydrolaseQuickGO ontologyBLASTP
22922222293079858alphabeta hydrolase fold proteinQuickGO ontologyBLASTP
22932072293830624hypothetical proteinBLASTP
22940372294408372thioredoxinQuickGO ontologyBLASTP
22945832295566984G5 domain-containing proteinQuickGO ontologyBLASTP
22958462296409564transcriptional regulator XRE familyQuickGO ontologyBLASTP
229638722977421356HipA domain-containing proteinQuickGO ontologyBLASTP
229776622991481383hypothetical proteinBLASTP
229939723008151419lipopolysaccharide biosynthesis proteinQuickGO ontologyBLASTP
230128023026711392hypothetical proteinBLASTP
23029642303086123BLASTP
23033152304031717hypothetical proteinBLASTP
230440723055941188Fis family transcriptional regulatorQuickGO ontologyBLASTP
230570323067791077proline symporterQuickGO ontologyBLASTP
23069232307312390ABC transporterQuickGO ontologyBLASTP
23073092307803495transcriptional regulator XRE familyQuickGO ontologyBLASTP
23078672308403537hypothetical proteinBLASTP
23095642309890327hypothetical protein
23099372310800864hypothetical proteinBLASTP
231090523137152811hypothetical proteinBLASTP
23139432314356414IS3 family transposaseQuickGO ontologyBLASTP
23162112316690480IstB domain-containing protein ATP-binding proteinQuickGO ontologyBLASTP
231710323183681266transposase IS116IS110IS902 family proteinQuickGO ontologyBLASTP
23183942318801408IS3 family transposaseQuickGO ontologyBLASTP
231909323206281536polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
23206402321335696hypothetical proteinBLASTP
232163323226821050family 2 glycosyl transferaseQuickGO ontologyBLASTP
232262623236871062transposase mutator typeQuickGO ontologyBLASTP
23236932324001309MFS permeaseQuickGO ontologyBLASTP
23242842325165882glycosyl transferase family proteinQuickGO ontologyBLASTP
23251902326143954capsular polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
23261252327120996family 2 glycosyl transferaseQuickGO ontologyBLASTP
232715523282791125group 1 glycosyl transferaseQuickGO ontologyBLASTP
232831323294821170hypothetical proteinBLASTP
232953423306281095family 2 glycosyl transferaseQuickGO ontologyBLASTP
23307732331591819glycosyltransferaseQuickGO ontologyBLASTP
23316892332159471hypothetical proteinBLASTP
23322342332839606protein tyrosine phosphataseQuickGO ontologyBLASTP