Pre_GI Gene

Host: NC_011742:1221416 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011742:1221416 Escherichia coli S88 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
122141612234822067side tail fiber protein homolog from lambdoid prophageQuickGO ontologyBLASTP
12234791223757279hypothetical proteinBLASTP
12237701224063294hypothetical proteinBLASTP
12241551225012858iron transport protein inner membrane componentQuickGO ontologyBLASTP
12250091225866858iron transport protein inner membrane componentQuickGO ontologyBLASTP
12258631226690828iron transport protein ATP-binding componentQuickGO ontologyBLASTP
12266901227604915iron transport protein periplasmic-binding proteinQuickGO ontologyBLASTP
12282911229061771hypothetical proteinBLASTP
12291841229339156hypothetical proteinBLASTP
12295331229685153BLASTP
12299471230351405hypothetical proteinBLASTP
12305721231303732DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
12312131231365153hypothetical proteinBLASTP
123150812327191212cyclic-di-GMP phosphodiesterase blue-light sensing protein using FAD BLUFQuickGO ontologyBLASTP
12330331233269237hypothetical proteinBLASTP
12333121233584273hypothetical proteinBLASTP
12336131233879267hypothetical proteinBLASTP
12339921234240249hypothetical proteinBLASTP
12345801235431852BLASTP
12355631235781219hypothetical proteinBLASTP
12361791236358180hypothetical proteinBLASTP
12366481237025378hypothetical proteinBLASTP
12371711237698528hypothetical proteinBLASTP
12377561238085330hypothetical proteinBLASTP
12380951238370276hypothetical protein
12390321239358327BLASTP
12397311239997267cell division topological specificity factor MinEQuickGO ontologyBLASTP
12400011240813813cell division inhibitor MinDQuickGO ontologyBLASTP
12408371241532696septum formation inhibitorQuickGO ontologyBLASTP
12420521242420369hypothetical proteinBLASTP
12425401242941402hypothetical proteinBLASTP
12431501243476327hypothetical proteinBLASTP
12435481244207660hypothetical proteinBLASTP
12442991244745447hypothetical proteinBLASTP
12450161245234219BLASTP
12455391245958420DNA polymerase V subunit UmuDQuickGO ontologyBLASTP
124595812472261269DNA polymerase V subunit UmuCQuickGO ontologyBLASTP