Pre_GI Gene

Host: NC_011742:3998285 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011742:3998285 Escherichia coli S88 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39973393998298960polysaccharide deacetylaseQuickGO ontologyBLASTP
399828539993191035glycosyl transferase family proteinQuickGO ontologyBLASTP
399955840005831026L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
4000593400178911972-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
40020034002935933ADP-L-glycero-D-manno-heptose-6-epimeraseQuickGO ontologyBLASTP
400294540039911047ADP-heptose--LPS heptosyltransferaseQuickGO ontologyBLASTP
40039954004975981ADP-heptose--LPS heptosyltransferaseQuickGO ontologyBLASTP
400504540062981254lipid A-core surface O-antigen ligaseQuickGO ontologyBLASTP
40063444007327984beta13-glucosyltransferaseQuickGO ontologyBLASTP
400740940084371029UDP-galactoseGalactosyl LPS alpha1 2-galactosyltransferaseQuickGO ontologyBLASTP
40084634009155693lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
40091654010160996UDP-galactoseGlucosyl LPS alpha1 2-galactosyltransferaseQuickGO ontologyBLASTP
401017740111931017UDP-glucoseGlucosyl LPS alpha1 3-glucosyltransferaseQuickGO ontologyBLASTP
40112094012015807kinase that phosphorylates core heptose of lipopolysaccharideQuickGO ontologyBLASTP
401199940131231125glucosyltransferase IQuickGO ontologyBLASTP
401312040141781059lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
4014591401586812783-deoxy-D-manno-octulosonic-acid transferaseQuickGO ontologyBLASTP
40158764016355480phosphopantetheine adenylyltransferaseQuickGO ontologyBLASTP
40163944017203810formamidopyrimidine-DNA glycosylaseQuickGO ontologyBLASTP
4017301401746816850S ribosomal protein L33QuickGO ontologyBLASTP
4017489401772523750S ribosomal protein L28QuickGO ontologyBLASTP
40179424018610669DNA repair protein RadCQuickGO ontologyBLASTP
401878240200021221bifunctional phosphopantothenoylcysteine decarboxylasephosphopantothenate synthaseQuickGO ontologyBLASTP
40199834020438456deoxyuridine 5-triphosphate nucleotidohydrolaseQuickGO ontologyBLASTP
40205454021141597nucleoid occlusion proteinQuickGO ontologyBLASTP
40211784021819642orotate phosphoribosyltransferaseQuickGO ontologyBLASTP