Pre_GI Gene

Host: NC_011982:206784 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011982:206784 Agrobacterium vitis S4 plasmid pTiS4, complete sequence

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
206784207011228BLASTP
207335207958624virPQuickGO ontologyBLASTP
2081592095801422transposaseQuickGO ontologyBLASTP
209856210158303hypothetical proteinBLASTP
2101692113891221transposase for insertion sequence element isrm3QuickGO ontologyBLASTP
211355211579225
211642212205564BLASTP
212205212795591BLASTP
2136272150151389indole acetamide hydrolaseQuickGO ontologyBLASTP
2153462175172172tryptophan 2-monooxygenaseQuickGO ontologyBLASTP
218078218695618BLASTP
218818219702885transposaseQuickGO ontologyBLASTP
219847220458612IS21 family transposaseQuickGO ontologyBLASTP
221625222335711isopentenyl transferaseQuickGO ontologyBLASTP
222853223242390D-vitopine dehydrogenaseQuickGO ontology
223484223786303D-vitopine dehydrogenaseQuickGO ontology
224691225107417hypothetical protein
225258225950693transcriptional regulatorQuickGO ontologyBLASTP
2261742275681395D-nopaline dehydrogenaseQuickGO ontologyBLASTP
2278512289211071D-nopaline dehydrogenaseQuickGO ontologyBLASTP
228990229787798ABC transporterQuickGO ontologyBLASTP
229784230641858ABC transporter membrane spanning protein mannopineQuickGO ontologyBLASTP
2306382316811044ABC transporter nucleotide bindingATPase proteinQuickGO ontologyBLASTP