Pre_GI Gene

Host: NC_011989:1638261 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011989:1638261 Agrobacterium vitis S4 chromosome 1, complete sequence

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
163826116429554695phage tail fiber proteinQuickGO ontologyBLASTP
164295216444481497hypothetical proteinBLASTP
16444641645069606hypothetical proteinBLASTP
16453171645676360hypothetical proteinBLASTP
16456801645931252hypothetical proteinBLASTP
16460081646625618hypothetical proteinBLASTP
16468611647298438HlyD family secretion proteinQuickGO ontology
16474821647868387hypothetical proteinBLASTP
164796416495051542hypothetical proteinBLASTP
164951316519452433glycosyl transferaseQuickGO ontologyBLASTP
165228016543162037hypothetical proteinBLASTP
165508816561011014transposaseQuickGO ontologyBLASTP
16565241656787264plasmid stable inheritance protein IQuickGO ontologyBLASTP
16567841657146363plasmid stable inheritance protein KQuickGO ontologyBLASTP
16576591658366708hypothetical proteinBLASTP
16583701658567198hypothetical protein
16585771659356780cobalamin synthaseQuickGO ontologyBLASTP
165967016606921023nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseQuickGO ontologyBLASTP
16606761661125450diacylglycerol kinaseQuickGO ontologyBLASTP
16611571661399243hypothetical protein
16616701661987318hypothetical protein
166214216635751434Carbohydrate-selective porin proteinQuickGO ontologyBLASTP
16636301664217588hypothetical protein
16642451664745501peptide deformylaseQuickGO ontologyBLASTP