Pre_GI Gene

Host: NC_012029:1525929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012029:1525929 Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genome

Host Lineage: Halorubrum lacusprofundi; Halorubrum; Halobacteriaceae; Halobacteriales; Euryarchaeota; Archaea

General Information: Formerly Halobacterium lacusprofundi, this organism is an extremely halophilic archaeon isolated from Deep Lake, Antarctica. Extremely halophilic archaeon isolated from the Antarctic. Halorubrum lacusprofundi is a red pigmented halophilic archaeon which has been found in hypersaline marine enviornments. Originally thought to be a psychrophile, further research determined that the optimum temperature for growth for Halorubrum lacusprofundi was from 31 - 37 degrees C.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
15259291526567639transposaseQuickGO ontologyBLASTP
152672015277211002Zinc finger TFIIB-type domain proteinQuickGO ontologyBLASTP
15278181527997180hypothetical protein
15282391528472234Protein of unknown function UPF0058QuickGO ontologyBLASTP
15286431529101459Protein of unknown function DUF555QuickGO ontologyBLASTP
152916915300959278-oxoguanine DNA glycosylase domain proteinQuickGO ontologyBLASTP
15302131530710498cyclasedehydraseQuickGO ontologyBLASTP
153077315322901518histidine kinaseQuickGO ontologyBLASTP
15325121533399888protein of unknown function DUF6 transmembraneQuickGO ontologyBLASTP
15335541533856303hypothetical proteinBLASTP
15338741534554681hypothetical proteinBLASTP
153495815350751185S ribosomal RNAQuickGO ontologyBLASTP
15352191538124290623S ribosomal RNAQuickGO ontologyBLASTP
1538408153847972tRNA-AlaQuickGO ontology
15386381540107147016S ribosomal RNAQuickGO ontologyBLASTP
15408351541395561TATA-box binding family proteinQuickGO ontologyBLASTP
154152815427301203orc1cdc6 family replication initiation proteinQuickGO ontologyBLASTP
154357615458282253malate dehydrogenaseQuickGO ontologyBLASTP
154596815470651098hypothetical protein
15472231548041819hypothetical protein
15481101548337228flagella cluster proteinQuickGO ontology
154837615500401665MATE efflux family proteinQuickGO ontologyBLASTP
155012715512451119MscS Mechanosensitive ion channelQuickGO ontologyBLASTP
15514031552143741protein of unknown function DUF75QuickGO ontologyBLASTP
155221715532691053transcriptional regulator TrmBQuickGO ontologyBLASTP
15533381554306969aldoketo reductaseQuickGO ontologyBLASTP