Pre_GI Gene

Host: NC_012125:1897611 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012125:1897611 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
189761118996622052protease 2QuickGO ontologyBLASTP
18996971900395699exodeoxyribonuclease XQuickGO ontologyBLASTP
19004191901075657hypothetical proteinBLASTP
19011831901413231DNA polymerase III subunit thetaQuickGO ontologyBLASTP
19015451901925381hypothetical proteinBLASTP
19019771902801825cation transporterQuickGO ontologyBLASTP
19028181903171354hypothetical proteinBLASTP
19035451904273729phage integrase proteinQuickGO ontologyBLASTP
19043171904511195hypothetical proteinBLASTP
19045911904773183Gifsy-1 prophage VtaPQuickGO ontologyBLASTP
19048611905436576hypothetical proteinBLASTP
19056851905882198hypothetical proteinBLASTP
19063071907077771hypothetical proteinBLASTP
19077251908525801hypothetical proteinBLASTP
19094591909728270phage integrase proteinQuickGO ontologyBLASTP
19097331910179447Rac prophage recombination and repair proteinQuickGO ontologyBLASTP
19103301910647318hypothetical proteinBLASTP
19106231910775153hypothetical proteinBLASTP
191093419120641131hypothetical proteinBLASTP
191247219144391968hydrolaseQuickGO ontologyBLASTP
19144571914648192hypothetical proteinBLASTP
19148481915462615hypothetical proteinBLASTP
19154721915624153hypothetical proteinBLASTP
19157631916677915hypothetical proteinBLASTP
19170701917198129hypothetical proteinBLASTP
19174681917992525fimbriae usher proteinQuickGO ontologyBLASTP
19180091918176168error-prone repair component of DNA polymerase V with UmuDQuickGO ontologyBLASTP
19186111918940330cytoplasmic proteinQuickGO ontologyBLASTP
19191031919435333transposaseQuickGO ontologyBLASTP
19194401919955516transposaseQuickGO ontologyBLASTP
19199551920101147transposaseQuickGO ontologyBLASTP
19204381920578141cytoplasmic proteinQuickGO ontologyBLASTP
19207441921013270hypothetical proteinBLASTP
19210601921254195hypothetical proteinBLASTP