Pre_GI Gene

Host: NC_012125:2826624 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012125:2826624 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
283816328395721410type I secretion proteinQuickGO ontologyBLASTP
283956928417492181type I secretion protein ATP-binding proteinQuickGO ontologyBLASTP
284173028429201191type I secretion proteinQuickGO ontologyBLASTP
28431392843453315hypothetical proteinBLASTP
28436702843879210Transposase insN for insertion sequence element ISQuickGO ontologyBLASTP
28439062844745840hypothetical proteinBLASTP
28452032845340138hypothetical protein
28453712846330960reverse transcriptase-like proteinQuickGO ontologyBLASTP
28463802847219840hypothetical proteinBLASTP
284844428499641521flagellinQuickGO ontologyBLASTP
28500802850628549DNA-invertase HinQuickGO ontologyBLASTP
28513042851486183hypothetical proteinBLASTP
285159128527061116glycosyltransferaseQuickGO ontologyBLASTP
285278728564433657ABC transporterQuickGO ontologyBLASTP
285655328577971245ferric enterochelin esteraseQuickGO ontologyBLASTP
28578292858764936hypothetical proteinBLASTP
285880628609862181outer membrane receptor FepAQuickGO ontologyBLASTP
28614382861569132hypothetical proteinBLASTP
286201828631301113hypothetical proteinBLASTP
28631422863480339hypothetical proteinBLASTP
28635892864518930virulence proteinQuickGO ontologyBLASTP
28646172864814198hypothetical proteinBLASTP
28648112865707897transcriptional regulatorQuickGO ontologyBLASTP
28662222866335114hypothetical proteinBLASTP
286642828674411014nickel transporterQuickGO ontologyBLASTP
286757428689891416two-component system sensor kinaseQuickGO ontologyBLASTP
28689762869650675transcriptional regulatorQuickGO ontologyBLASTP
28698042870781978tricarboxylic transportQuickGO ontologyBLASTP
28707932871227435hypothetical proteinBLASTP
287123828727521515hypothetical proteinBLASTP
28729162873029114hypothetical proteinBLASTP
28730462874032987hypothetical proteinBLASTP
287405828753261269hydroxyglutarate oxidaseQuickGO ontologyBLASTP
287534828767961449succinate-semialdehyde dehydrogenase IQuickGO ontologyBLASTP
2876811287809412844-aminobutyrate aminotransferaseQuickGO ontologyBLASTP
287822428796241401gamma-aminobutyrate transporterQuickGO ontologyBLASTP