Pre_GI Gene

Host: NC_012660:2684981 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012660:2684981 Pseudomonas fluorescens SBW25 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
268498126860241044putative nucleoside-sepcific transporter substrate-binding proteinQuickGO ontologyBLASTP
26860392686986948nucleoside-specific channel-forming proteinQuickGO ontologyBLASTP
26871422688080939putative AraC family regulatory proteinQuickGO ontologyBLASTP
268829126896011311putative transporter-like exported proteinQuickGO ontologyBLASTP
26896212690394774sorbitol dehydrogenaseQuickGO ontologyBLASTP
26904012691093693hypothetical proteinBLASTP
26921242692600477hypothetical proteinBLASTP
26926482693094447hypothetical proteinBLASTP
26931822693568387hypothetical proteinBLASTP
26938782694252375hypothetical proteinBLASTP
26943772694727351hypothetical protein
26954892696427939putative oxidoreductaseQuickGO ontologyBLASTP
26965332696991459hypothetical proteinBLASTP
269700926985381530putative transposaseQuickGO ontologyBLASTP
26986202698838219BLASTP
269954027015432004putative methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
270191227030511140hypothetical proteinBLASTP
270330527043961092putative DNA methyltransferaseQuickGO ontologyBLASTP
27044812705317837hypothetical proteinBLASTP
270572627070481323putative chloride transport channel membrane proteinQuickGO ontologyBLASTP
27071842707309126BLASTP
27073312707756426BLASTP
27079282708293366hypothetical proteinBLASTP
27084102709372963putative AraC family regulatory proteinQuickGO ontologyBLASTP
27095672710160594hypothetical protein
271030527119331629putative methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
27121092713083975putative regulatory proteinQuickGO ontologyBLASTP
271339627147091314putative methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
27147752715206432hypothetical protein
27152902715454165hypothetical protein
27157982716466669hypothetical proteinBLASTP
27174302717879450hypothetical protein