Pre_GI Gene

Host: NC_012667:931390 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012667:931390 Vibrio cholerae MJ-1236 chromosome 2, complete genome

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
930521931393873transposase OrfAB subunit BQuickGO ontologyBLASTP
931390931734345transposase OrfAB subunit AQuickGO ontologyBLASTP
932253932666414glyoxalase family proteinQuickGO ontologyBLASTP
933063933179117hypothetical protein
933475933843369DNA-damage-inducible protein JQuickGO ontologyBLASTP
933840934118279plasmid stabilization system proteinQuickGO ontologyBLASTP
93471193480696hypothetical proteinBLASTP
934903935028126hypothetical proteinBLASTP
935031935195165hypothetical proteinBLASTP
935327935848522hypothetical proteinBLASTP
935842936117276hypothetical proteinBLASTP
936303936983681maleylacetoacetate isomeraseglutathione S-transferaseQuickGO ontologyBLASTP
937052937399348hypothetical proteinBLASTP
938099938275177hypothetical proteinBLASTP
938381938818438IS1004 transposaseQuickGO ontologyBLASTP
938862939233372hypothetical proteinBLASTP
939442939936495hypothetical proteinBLASTP
9402429419121671hypothetical proteinBLASTP
942411942803393hypothetical protein
942803943177375hypothetical protein
945976946689714hypothetical proteinBLASTP
9474309485031074hypothetical proteinBLASTP
948589949440852hypothetical proteinBLASTP
949816949962147hypothetical proteinBLASTP
950111950833723hypothetical protein
95139095148899hypothetical protein
952291953058768hypothetical proteinBLASTP
953147954022876hypothetical proteinBLASTP
954084954293210hypothetical proteinBLASTP
954305954781477hypothetical proteinBLASTP
9559749577221749hypothetical proteinBLASTP
958922959839918lipase GDXG familyQuickGO ontologyBLASTP
960073960375303plasmid stabilization system proteinQuickGO ontologyBLASTP
960363960620258antitoxin of toxin-antitoxin stability systemQuickGO ontologyBLASTP
960822961355534GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
961352961672321hypothetical proteinBLASTP
961844962215372MazG-related proteinQuickGO ontologyBLASTP
962795963523729hypothetical proteinBLASTP
963694963966273hypothetical proteinBLASTP
963963964460498GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
964662964814153hypothetical proteinBLASTP
965057965200144hypothetical proteinBLASTP
965136965591456hypothetical proteinBLASTP
965719966009291stability protein StbEQuickGO ontologyBLASTP
965996966268273stability protein StbDQuickGO ontologyBLASTP
966461966874414glyoxalase family proteinQuickGO ontologyBLASTP
967062967463402doc proteinQuickGO ontologyBLASTP
967463968155693hypothetical proteinBLASTP
968326968643318acetyltransferaseQuickGO ontologyBLASTP
968666969646981IS5 transposaseQuickGO ontologyBLASTP
970094970528435acetyltransferaseQuickGO ontologyBLASTP
970665970979315hypothetical proteinBLASTP
970966971298333cytotoxic translational repressor of toxin-antitoxin stability systemQuickGO ontologyBLASTP
971451971609159hypothetical proteinBLASTP
971960972118159hypothetical proteinBLASTP
973487973885399biphenyl-23-diol 12-dioxygenase III-related proteinQuickGO ontologyBLASTP
973889974038150hypothetical proteinBLASTP
974263974373111hypothetical proteinBLASTP
975158975262105hypothetical proteinBLASTP
97556397566199hypothetical proteinBLASTP
976144976704561hypothetical proteinBLASTP
976851977708858hypothetical proteinBLASTP
978841978975135hypothetical proteinBLASTP
980232981080849sulfate-binding protein sbpQuickGO ontologyBLASTP
981463981927465hypothetical proteinBLASTP
983900984295396hypothetical proteinBLASTP
984503984928426hypothetical proteinBLASTP
985200985892693hemagglutinin associated proteinQuickGO ontologyBLASTP
986279986407129hypothetical proteinBLASTP
986424986672249DNA for RVC repeated sequenceQuickGO ontologyBLASTP
986662986952291RelE proteinQuickGO ontologyBLASTP
987088987603516lipoprotein BlcQuickGO ontologyBLASTP
987740988216477hypothetical proteinBLASTP
988351989280930hypothetical proteinBLASTP
989999990763765microcin immunity protein MccFQuickGO ontologyBLASTP
991191991307117hypothetical proteinBLASTP
991398991508111hypothetical proteinBLASTP
991679991996318hypothetical proteinBLASTP
992007992360354HigB toxin proteinQuickGO ontologyBLASTP
992955993101147hypothetical proteinBLASTP
993166993402237hypothetical proteinBLASTP
99342799352599hypothetical proteinBLASTP
99359199368999hypothetical proteinBLASTP
994330994983654hypothetical proteinBLASTP
995040995549510toxin resistance proteinQuickGO ontologyBLASTP
995791996033243hypothetical proteinBLASTP
996052996369318ParE toxin proteinQuickGO ontologyBLASTP
99656399665896hypothetical proteinBLASTP
996715996825111hypothetical protein
997950998444495hypothetical proteinBLASTP
998571998750180hypothetical proteinBLASTP
998735998869135hypothetical proteinBLASTP
999047999649603hypothetical proteinBLASTP
10002991000418120hypothetical proteinBLASTP
10012191001365147hypothetical proteinBLASTP
10014311001754324hypothetical proteinBLASTP
100193410029711038hypothetical proteinBLASTP
10031021003212111hypothetical proteinBLASTP
10033231003667345transposase OrfAB subunit AQuickGO ontologyBLASTP
10036641004536873transposase OrfAB subunit BQuickGO ontologyBLASTP
10045331005228696hypothetical proteinBLASTP
100583610068581023hypothetical proteinBLASTP
10070761007669594hypothetical proteinBLASTP
10095261010209684hypothetical proteinBLASTP
10113451011806462hypothetical proteinBLASTP
10117931012092300hypothetical proteinBLASTP
10121251012253129hypothetical proteinBLASTP
10122201012615396hypothetical proteinBLASTP
10128291013008180hypothetical proteinBLASTP
10129871013121135hypothetical proteinBLASTP
10137061014413708hypothetical proteinBLASTP
10145271015153627hypothetical proteinBLASTP
10153021015868567hypothetical proteinBLASTP
10159751016157183hypothetical proteinBLASTP
10172101017725516lipoprotein BlcQuickGO ontologyBLASTP
10178361018204369RelB proteinQuickGO ontologyBLASTP
10182011018479279plasmid stabilization system proteinQuickGO ontologyBLASTP
10186301019043414glyoxalase family proteinQuickGO ontologyBLASTP
10192311019710480H-REV 107-related proteinQuickGO ontologyBLASTP
10204911020592102hypothetical protein
10207521021177426hypothetical proteinBLASTP
10214461021697252hypothetical proteinBLASTP
10223521022750399biphenyl-23-diol 12-dioxygenase III-related proteinQuickGO ontologyBLASTP
10234521023604153hypothetical proteinBLASTP
10241751024534360glyoxalase family proteinQuickGO ontologyBLASTP