Pre_GI Gene

Host: NC_012791:651480 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012791:651480 Variovorax paradoxus S110 chromosome 1, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6501716514991329sun proteinQuickGO ontologyBLASTP
651480652127648putative proline rich signal peptide proteinQuickGO ontologyBLASTP
6521246544542331PASPAC sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
654546655247702response regulator receiver proteinQuickGO ontologyBLASTP
65526665534176tRNA-PheQuickGO ontologyBLASTP
655833656099267transposase IS3IS911 family proteinQuickGO ontologyBLASTP
656317656589273transcriptional regulator XRE familyQuickGO ontologyBLASTP
656857657270414hypothetical proteinBLASTP
6573146583421029hypothetical proteinBLASTP
658542658889348hypothetical proteinBLASTP
659041659496456hypothetical protein
6595596605871029phageplasmid-related protein TIGR03299QuickGO ontologyBLASTP
660681661424744phage-type endonucleaseQuickGO ontologyBLASTP
661955662488534hypothetical proteinBLASTP
662485662817333hypothetical protein
662804663055252hypothetical proteinBLASTP
663961664188228hypothetical protein
664205665164960hypothetical proteinBLASTP
665224665709486putative transcriptional regulator CrpFnr familyQuickGO ontologyBLASTP
665931666040110
6661536673551203porin Gram-negative typeQuickGO ontologyBLASTP
667566668486921hypothetical proteinBLASTP
6685616698531293Carboxylesterase type BQuickGO ontologyBLASTP
669937670857921hypothetical protein