Pre_GI Gene

Host: NC_012917:2971702 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012917:2971702 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
29717022972091390response regulator receiver proteinQuickGO ontologyBLASTP
297213029731821053response regulator receiver modulated CheB methylesteraseQuickGO ontologyBLASTP
29731822974054873MCP methyltransferase CheR-typeQuickGO ontologyBLASTP
297457129762561686methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
29763922976889498CheW proteinQuickGO ontologyBLASTP
297692129789302010CheA signal transduction histidine kinaseQuickGO ontologyBLASTP
297897029800221053OmpAMotB domain proteinQuickGO ontologyBLASTP
29800192980906888flagellar motor protein MotAQuickGO ontologyBLASTP
29810412981619579flagellar transcriptional activator FlhCQuickGO ontologyBLASTP
29816232981973351flagellar transcriptional activatorQuickGO ontologyBLASTP
29827842983716933hypothetical proteinBLASTP
298402729857481722methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
29858102986013204hypothetical proteinBLASTP
298622429876391416diguanylate cyclaseQuickGO ontologyBLASTP
29879152988133219hypothetical proteinBLASTP
29883532988709357hypothetical protein
298922829902351008integrase family proteinQuickGO ontologyBLASTP
29902562991086831hypothetical proteinBLASTP
29911352991737603hypothetical proteinBLASTP
29917532992097345hypothetical proteinBLASTP
29923892992802414transcriptional regulator XRE familyQuickGO ontologyBLASTP
29928632993138276hypothetical protein
29931102993571462hypothetical protein