Pre_GI Gene

Host: NC_012947:248000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012947:248000 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2481582512713114transporter hydrophobeamphiphile efflux-1 HAE1 familyQuickGO ontologyBLASTP
2512962524531158multidrug efflux system protein MdtEQuickGO ontologyBLASTP
252513252791279hypothetical proteinBLASTP
252792253319528LuxR family transcriptional regulatorQuickGO ontologyBLASTP
254118254690573acid-resistance membrane proteinQuickGO ontologyBLASTP
254945255277333acid-resistance proteinQuickGO ontologyBLASTP
255381255719339acid-resistance proteinQuickGO ontologyBLASTP
255783256430648Mg2 transport ATPaseQuickGO ontologyBLASTP
256472257002531LuxR family transcriptional regulatorQuickGO ontologyBLASTP
257158257724567outer membrane lipoprotein Slp familyQuickGO ontologyBLASTP
2579722591951224hypothetical proteinBLASTP
259824260249426arsenate reductaseQuickGO ontologyBLASTP
2602622615511290arsenical pump membrane proteinQuickGO ontologyBLASTP
261605261958354DNA-binding transcriptional repressor ArsRQuickGO ontologyBLASTP
262497262670174hypothetical proteinBLASTP
2628352641871353glutathione reductaseQuickGO ontologyBLASTP
264259265101843hypothetical proteinBLASTP
2653042673462043oligopeptidase AQuickGO ontologyBLASTP
267354268106753methyltransferaseQuickGO ontologyBLASTP
2681552696241470inner membrane transporter YhiPQuickGO ontologyBLASTP
269942270376435UspA domain proteinQuickGO ontologyBLASTP
270767271102336universal stress protein UspBQuickGO ontologyBLASTP
2713462728451500phosphate transporterQuickGO ontologyBLASTP
2730772742791203HI0933 family proteinQuickGO ontologyBLASTP
2745942756461053hypothetical proteinBLASTP
2760292776361608hypothetical proteinBLASTP
2778982795201623hypothetical proteinBLASTP
2798862809531068secretion protein HlyDQuickGO ontologyBLASTP
2809502836852736ABC transporterQuickGO ontologyBLASTP
2836852848091125ABC transporterQuickGO ontologyBLASTP
2849742861101137transposase IS4 family proteinQuickGO ontologyBLASTP
286356286601246hypothetical proteinBLASTP
286706287089384hypothetical proteinBLASTP
2870612912964236hypothetical proteinBLASTP