Pre_GI Gene

Host: NC_013061:3390399 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013061:3390399 Pedobacter heparinus DSM 2366, complete genome

Host Lineage: Pedobacter heparinus; Pedobacter; Sphingobacteriaceae; Sphingobacteriales; Bacteroidetes; Bacteria

General Information: Isolation: Soil; Temp: Mesophile; Temp: 25 - 30C; Habitat: Soil. Formerly Sphingobacterium heparinum this organism was isolated from soil. This organism is able to degrade heparin and heparan sulfate glycosaminoglycans, which are components of extracellular polysaccharides and the cell surface.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
339039933935483150TonB-dependent receptor plugQuickGO ontologyBLASTP
339384633950481203glycosyl hydrolase family 88QuickGO ontologyBLASTP
33953033396139837hypothetical protein
33961423396768627hypothetical proteinBLASTP
33969143397069156hypothetical protein
339706633982171152NUDIX hydrolaseQuickGO ontologyBLASTP
33983403398918579RNA polymerase sigma-70 factorQuickGO ontologyBLASTP
339899234002631272SMC domain proteinQuickGO ontologyBLASTP
34002663400973708hypothetical protein
340107334021881116FecR proteinQuickGO ontologyBLASTP
340240734058233417TonB-dependent receptor plugQuickGO ontologyBLASTP
340584034072791440RagBSusD domain proteinQuickGO ontologyBLASTP
340734534086371293alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergenQuickGO ontologyBLASTP
340862734100011375BLASTP
34100393410221183hypothetical protein
34103733410675303hypothetical proteinBLASTP
34106763411098423hypothetical proteinBLASTP
34111613411622462hypothetical proteinBLASTP
341213234134151284Glycine C-acetyltransferaseQuickGO ontologyBLASTP
34134293414163735hypothetical proteinBLASTP