Pre_GI Gene

Host: NC_013159:2913927 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013159:2913927 Saccharomonospora viridis DSM 43017, complete genome

Host Lineage: Saccharomonospora viridis; Saccharomonospora; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism has been implicated in a range of hypersensitivity pneumonitides, including farmer's lung disease. Symptoms of the disease develop in susceptible individuals following the inhalation of spores from overheated materials such as moldy hay and bagasse, or from forced-air heating and humidification systems. Prolonged exposure to the antigens results in acute respiratory distress which may lead to irreversible lung damage. Saccharomonospora viridis DSM 43017 was isolated from Irish peat and was originally classified as Thermomonospora viridis.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
291392729174813555methionine synthase B12-dependentQuickGO ontologyBLASTP
29174782918443966sugar kinase ribokinaseQuickGO ontologyBLASTP
291862729198261200methionine adenosyltransferaseQuickGO ontologyBLASTP
291988429215631680glycinesarcosine N-methyltransferaseQuickGO ontologyBLASTP
29227632923650888hypothetical protein
29239832924870888Helix-turn-helix proteinQuickGO ontologyBLASTP
29253432925540198BLASTP
29261122926918807transcriptional regulatorQuickGO ontologyBLASTP
29270002927257258transcriptional regulatorQuickGO ontologyBLASTP
29274962928020525conserved protein containing a Zn-ribbon-like motif possibly RNA-bindingQuickGO ontologyBLASTP
29280312928435405anti-anti-sigma factorQuickGO ontologyBLASTP
29284812928678198
29288002929600801RNA polymerase sigma factor sigma-70 familyQuickGO ontologyBLASTP
29297322930280549aerobic-type carbon monoxide dehydrogenase small subunit CoxSCutS-like proteinQuickGO ontologyBLASTP
29302772931269993aerobic-type carbon monoxide dehydrogenase middle subunit CoxMCutM-like proteinQuickGO ontologyBLASTP
293126629333772112xanthine dehydrogenase molybdenum binding subunit apoproteinQuickGO ontologyBLASTP
29333872934232846dehydrogenase of unknown specificity short-chain alcohol dehydrogenase like proteinQuickGO ontologyBLASTP