Pre_GI Gene

Host: NC_013315:1707293 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013315:1707293 Clostridium difficile CD196 chromosome, complete genome

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
17072931708120828hypothetical proteinBLASTP
17081921708632441phage proteinQuickGO ontologyBLASTP
17089731709134162hypothetical protein
17107781711644867prophage antirepressor-related proteinQuickGO ontologyBLASTP
17125091713036528hypothetical protein
17131741713941768hypothetical proteinBLASTP
171400717163792373phage tail tape measure proteinQuickGO ontologyBLASTP
17163961717085690phage cell wall hydrolaseQuickGO ontologyBLASTP
171709317189701878phage cell wall hydrolaseQuickGO ontologyBLASTP
17189841719244261phage proteinQuickGO ontologyBLASTP
17192491719668420phage proteinQuickGO ontologyBLASTP
171968117207181038phage tail proteinQuickGO ontologyBLASTP
17207111721328618phage proteinQuickGO ontologyBLASTP
172134017223651026phage tail fiber proteinQuickGO ontologyBLASTP
172238217239081527hypothetical proteinBLASTP
17239231724216294hypothetical proteinBLASTP
17242161724398183hypothetical proteinBLASTP
17244321724998567hypothetical protein
17253231725580258holinQuickGO ontologyBLASTP
17258411726704864hypothetical proteinBLASTP
17267831727595813N-acetylmuramoyl-l-alanine amidaseQuickGO ontologyBLASTP
172768917300882400penicillin-binding proteinQuickGO ontologyBLASTP