Pre_GI Gene

Host: NC_013315:4015119 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013315:4015119 Clostridium difficile CD196 chromosome, complete genome

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
401511940164771359multidrug resistance proteinQuickGO ontologyBLASTP
40169614017377417hypothetical proteinBLASTP
40175344018151618hypothetical proteinBLASTP
401865540213602706collagen-binding surface proteinQuickGO ontologyBLASTP
40215854021908324conjugative transposon proteinQuickGO ontologyBLASTP
40229224023380459hypothetical proteinBLASTP
40234054023947543hypothetical proteinBLASTP
40239834024510528hypothetical proteinBLASTP
402462040260141395conjugative transposon FtsKSpoIIIE-like proteinQuickGO ontologyBLASTP
402629440274151122conjugative transposon replication initiation factorQuickGO ontologyBLASTP
40275574027778222conjugative transposon proteinQuickGO ontologyBLASTP
40280924028736645chloramphenicol o-acetyltransferaseQuickGO ontologyBLASTP
40290224029519498conjugative transposon proteinQuickGO ontologyBLASTP
40295354030038504conjugative transposon proteinQuickGO ontologyBLASTP
403052740329592433conjugative transposon proteinQuickGO ontologyBLASTP
403295940350942136conjugative transposon proteinQuickGO ontologyBLASTP
403509140360981008cell wall hydrolaseQuickGO ontologyBLASTP
40361144037007894conjugative transposon proteinQuickGO ontologyBLASTP
40372204038077858hypothetical proteinBLASTP
40381494038736588transcriptional regulatorQuickGO ontologyBLASTP
40387654039685921ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
40396824040365684ABC transporter permeaseQuickGO ontologyBLASTP
40403624041060699ABC transporter permeaseQuickGO ontologyBLASTP
40410724041983912hypothetical proteinBLASTP
40428644043292429hypothetical proteinBLASTP
404340740445881182integraseQuickGO ontologyBLASTP
40449284045740813MerR family transcriptional regulatorQuickGO ontologyBLASTP
404719940483171119transposase-like protein bQuickGO ontologyBLASTP