Pre_GI Gene

Host: NC_013316:2033906 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013316:2033906 Clostridium difficile R20291, complete genome

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
203390620373433438putative signaling proteinQuickGO ontologyBLASTP
20373612038107747hypothetical proteinBLASTP
20380562038364309hypothetical proteinBLASTP
20404002040708309BLASTP
20407272041008282putative membrane protein precursorQuickGO ontologyBLASTP
204109420421161023putative conjugative transposon proteinQuickGO ontologyBLASTP
204367720455571881site-specific recombinase resolvase family putativeQuickGO ontologyBLASTP
20455842045937354hypothetical proteinBLASTP
20459452046253309hypothetical proteinBLASTP
20462812046649369hypothetical proteinBLASTP
20469242047667744two-component response regulatorQuickGO ontologyBLASTP
20476732048590918sensor proteinQuickGO ontologyBLASTP
20486892049651963putative lantibiotic abc transporteratp-binding proteinQuickGO ontologyBLASTP
20496442050429786putative lantibiotic abc transporter permease proteinQuickGO ontologyBLASTP
20504322051211780putative lantibiotic abc transporter permease proteinQuickGO ontologyBLASTP
20512192051680462hypothetical proteinBLASTP
20521252052538414rna polymerase sigma-24 subunit ecf subfamily ecf subfamily rna polymerase sigma-70 factorQuickGO ontologyBLASTP
20526402053092453sigma-24 feciQuickGO ontologyBLASTP
20530672053564498rna polymerase sigma-24 subunit ecf subfamilyQuickGO ontologyBLASTP
20535842053883300hypothetical proteinBLASTP
205406420555151452BLASTP
20556232055913291addiction module toxin relestbe familyQuickGO ontologyBLASTP
20559102056278369addiction module antitoxin relbdinj familyQuickGO ontologyBLASTP
20563152056713399hypothetical proteinBLASTP
20568272057561735phage proteinQuickGO ontologyBLASTP
20577262058421696replicative dna helicaseQuickGO ontologyBLASTP
20586982059102405hypothetical protein
20598762060253378hypothetical proteinBLASTP
20606702061518849transcription regulator yobd proteinQuickGO ontologyBLASTP
20616952062177483hypothetical protein
206313720641381002hypothetical protein
20642802064840561hypothetical proteinBLASTP
206480020661581359hypothetical proteinBLASTP
206666620683181653hypothetical proteinBLASTP
206884520705181674hypothetical proteinBLASTP
20714542071891438hypothetical proteinBLASTP
20723652073348984hypothetical proteinBLASTP
20745932075183591hypothetical proteinBLASTP
20760202076331312putative conjugal transfer protein putative single-stranded dna binding proteinQuickGO ontologyBLASTP
20768812077258378hypothetical proteinBLASTP
20773752077809435hypothetical proteinBLASTP
207780220791031302hypothetical proteinBLASTP
20791972080003807hypothetical proteinBLASTP
20806722081013342hypothetical proteinBLASTP
20810062081302297hypothetical proteinBLASTP
20817682081929162hypothetical protein
208228420835131230hypothetical proteinBLASTP
20835402084223684BLASTP
208420120855291329hypothetical proteinBLASTP
20855582085797240hypothetical proteinBLASTP
208596920876391671hypothetical proteinBLASTP
20878332088696864putative conjugative transposon membrane proteinQuickGO ontologyBLASTP
208931520917082394putative conjugal transfer proteinQuickGO ontologyBLASTP
209171220938442133hypothetical proteinBLASTP
209407020956111542putative cell surface proteinQuickGO ontologyBLASTP
209570620974121707putative DNA topoisomeraseQuickGO ontologyBLASTP
20974972098300804hypothetical proteinBLASTP
209838321071128730putative helicaseQuickGO ontologyBLASTP
21071372107814678hypothetical proteinBLASTP
210838721100091623putative conjugative transposon DNA recombination proteinQuickGO ontologyBLASTP
211000621110731068putative conjugative transposon hypothetical proteinQuickGO ontologyBLASTP
21115522112358807hypothetical proteinBLASTP
211239421137251332putative conjugative transposon mobilization proteinQuickGO ontologyBLASTP
211441521155721158hypothetical proteinBLASTP