Pre_GI Gene

Host: NC_013440:5509790 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013440:5509790 Haliangium ochraceum DSM 14365, complete genome

Host Lineage: Haliangium ochraceum; Haliangium; Kofleriaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Isolation: Seaweed collected from coastal sands from Japan; Temp: Mesophile; Temp: 30C; Habitat: Coastal, Marine, Sand. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. Haliangium ochraceum is a true marine organism requiring 1-3% NaCl for growth.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
550979055139564167DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
551408055182914212DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
55187375519120384ribosomal protein L7L12QuickGO ontologyBLASTP
55193085519832525ribosomal protein L10QuickGO ontologyBLASTP
55201315520838708ribosomal protein L1QuickGO ontologyBLASTP
55210025521571570NusG antitermination factorQuickGO ontologyBLASTP
55216425522013372preprotein translocase SecE subunitQuickGO ontologyBLASTP
5522082552215776tRNA-TrpQuickGO ontology
552250755237001194translation elongation factor TuQuickGO ontologyBLASTP
5523904552397976tRNA-GlyQuickGO ontology
5524002552408685tRNA-TyrQuickGO ontologyBLASTP
5524174552424673tRNA-ThrQuickGO ontology
55243835524778396hypothetical protein
552487455262891416Glutamate--putrescine ligaseQuickGO ontologyBLASTP
552636655277571392Aldehyde DehydrogenaseQuickGO ontologyBLASTP
55278335528420588hypothetical protein
55286335529082450ribosomal protein L13QuickGO ontologyBLASTP
55291165529511396ribosomal protein S9QuickGO ontologyBLASTP
552990155324082508integral membrane sensor hybrid histidine kinaseQuickGO ontologyBLASTP
553255855348552298sulfataseQuickGO ontologyBLASTP
553475255363711620hypothetical protein