Pre_GI Gene

Host: NC_013716:1138441 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013716:1138441 Citrobacter rodentium ICC168, complete genome

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11384411139103663hypothetical proteinBLASTP
11392261139690465putative CoA-binding proteinQuickGO ontologyBLASTP
11397431140060318hypothetical proteinBLASTP
114011811412211104hypothetical proteinBLASTP
11414031141684282putative acylphosphataseQuickGO ontologyBLASTP
11416811142007327sulfurtransferase tRNA 2-thiouridine synthesizing protein EQuickGO ontologyBLASTP
11421011142760660putative outer membrane proteinQuickGO ontologyBLASTP
1143035114311985tRNA-SerQuickGO ontologyBLASTP
114417211457431572ISCro1 transposase CQuickGO ontologyBLASTP
11457631146110348ISCro1 transposase BQuickGO ontologyBLASTP
11461101146787678ISCro1 transposase AQuickGO ontologyBLASTP
114686211479171056hypothetical protein
11479821148488507hypothetical protein
11485201149518999putative prophage membrane proteinQuickGO ontologyBLASTP
11499041150443540putative phage lysozymeQuickGO ontologyBLASTP
11504401150814375putative prophage exported proteinQuickGO ontologyBLASTP
11511981151500303BLASTP
11515071151653147hypothetical protein
11518621152482621hypothetical proteinBLASTP
11525501153470921hypothetical proteinBLASTP
11534811153981501hypothetical proteinBLASTP
11544071154559153hypothetical protein
11550471155163117hypothetical protein
11553531155565213hypothetical protein
1160668116071245
11610701161786717hypothetical proteinBLASTP
116201911632991281putative gluconate dehydrogenase subunitQuickGO ontologyBLASTP
116331211650541743putative gluconate dehydrogenase subunitQuickGO ontologyBLASTP
11650571165782726putative gluconate dehydrogenase subunitQuickGO ontologyBLASTP
116618211672941113putative outer membrane proteinQuickGO ontologyBLASTP
116733611684151080putative electron transport proteinQuickGO ontologyBLASTP