Pre_GI Gene

Host: NC_013716:2898434 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013716:2898434 Citrobacter rodentium ICC168, complete genome

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
289843428997441311fatty acid oxidation comple beta subunit 3-ketoacyl-CoA thiolaseQuickGO ontologyBLASTP
28999182900226309hypothetical proteinBLASTP
290056729019041338long-chain fatty acid transport proteinQuickGO ontologyBLASTP
29020252902780756lipoproteinQuickGO ontologyBLASTP
290285729039991143hypothetical proteinBLASTP
29042852904425141
29049322905105174hypothetical proteinBLASTP
29052142905456243hypothetical proteinBLASTP
29054402905688249hypothetical proteinBLASTP
29057912905976186hypothetical protein
29061922907142951putative MarR-family transcriptional regulatorQuickGO ontologyBLASTP
29073452907614270hypothetical protein
29076282908182555putative lipoproteinQuickGO ontologyBLASTP
29082992908460162hypothetical protein
29085032909411909LysR-family transcriptional regulatorQuickGO ontologyBLASTP
29095772910110534hypothetical proteinBLASTP
29101152910441327hypothetical proteinBLASTP
29104552911294840hypothetical proteinBLASTP
291178929146982910putative outer membrane autotransporterQuickGO ontologyBLASTP
29149272915430504T6SS lysozyme-related protein Cts1DQuickGO ontologyBLASTP
29154172916214798ImpE family T6SS protein Cts1EQuickGO ontologyBLASTP
29162322917095864T6SS protein Cts1FQuickGO ontologyBLASTP