Pre_GI Gene

Host: NC_013716:3512950 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013716:3512950 Citrobacter rodentium ICC168, complete genome

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
351295035140321083putative permeaseQuickGO ontologyBLASTP
351414535156471503hypothetical proteinBLASTP
351578335168021020putative zinc-binding dehydrogenaseQuickGO ontologyBLASTP
3517004351708582tRNA-LeuQuickGO ontologyBLASTP
351815335197721620hypothetical proteinBLASTP
35200763520987912putative conjugative transfer system protein TraC fragmentQuickGO ontologyBLASTP
35210733521366294hypothetical proteinBLASTP
352197735235931617putative type I restriction modification system HsdS componentQuickGO ontologyBLASTP
352359835252441647hypothetical proteinBLASTP
35258853526853969IS102 transposaseQuickGO ontologyBLASTP
352723635287381503putative type I restriction modification system HsdM componentQuickGO ontologyBLASTP
352891135307131803hypothetical proteinBLASTP
353080535322831479putative conjugative transfer system protein TraG fragmentQuickGO ontologyBLASTP
35322803532537258hypothetical proteinBLASTP
35339063534106201BLASTP
35342373534587351BLASTP
35356233536411789hypothetical proteinBLASTP
35370633537416354hypothetical proteinBLASTP
35374203537746327hypothetical proteinBLASTP
35377643537997234hypothetical proteinBLASTP
35379943538320327hypothetical proteinBLASTP
35383983538565168hypothetical protein
35385523539238687hypothetical proteinBLASTP
35393013540062762hypothetical protein
35426813543016336BLASTP
35430123543440429BLASTP
35434163544066651putative conjugative transfer system protein TraGQuickGO ontologyBLASTP
35440733544681609hypothetical proteinBLASTP
35447073545138432BLASTP
35452593545675417hypothetical proteinBLASTP
35459693546220252hypothetical protein
35462293546720492hypothetical proteinBLASTP
35467133547411699hypothetical proteinBLASTP
354768435490031320hypothetical proteinBLASTP
35497593550055297putative transcriptional regulatorQuickGO ontologyBLASTP
35501413550251111hypothetical protein
355047435515501077hypothetical proteinBLASTP
355151635527211206hypothetical proteinBLASTP
35527403553279540hypothetical proteinBLASTP
355473435560891356replicative DNA helicaseQuickGO ontologyBLASTP
35560823556456375hypothetical proteinBLASTP
35564533557337885putative partitioning protein AQuickGO ontologyBLASTP
35576743558192519putative integraseQuickGO ontologyBLASTP
35584183558702285ISEc14 transposase AQuickGO ontologyBLASTP
35587413559553813ISEc14 transposase BQuickGO ontologyBLASTP