Pre_GI Gene

Host: NC_013929:3299736 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:3299736 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
329973633010371302homoserine dehydrogenaseQuickGO ontologyBLASTP
330142433028151392diaminopimelate decarboxylaseQuickGO ontologyBLASTP
330294433041401197arginyl tRNA synthetaseQuickGO ontologyBLASTP
33043393304827489regulatory proteinQuickGO ontologyBLASTP
330492733067921866BLASTP
3305022330509372tRNA-ArgQuickGO ontology
33068953307248354hypothetical protein
33073713307766396hypothetical proteinBLASTP
33079643308791828hypothetical proteinBLASTP
330897033111682199hypothetical proteinBLASTP
33117283312327600methyltransferaseQuickGO ontologyBLASTP
33125463313253708hypothetical protein
331325033143351086hypothetical protein
33143323315063732hypothetical protein
33152613315482222hypothetical protein
33159953316228234hypothetical protein
331655633181421587hypothetical protein
33182973318848552hypothetical proteinBLASTP
33190663319323258
33201233320476354hypothetical protein
33206243321094471hypothetical protein
33212713321879609hypothetical proteinBLASTP
33218763322202327hypothetical proteinBLASTP
33219903322133144hypothetical protein
33221993322522324hypothetical proteinBLASTP
332274233239081167hypothetical proteinBLASTP
33239273324655729hypothetical proteinBLASTP
332516433276052442type I restriction modification system proteinQuickGO ontologyBLASTP
33282223328884663type I restriction protein fragmentQuickGO ontologyBLASTP
332888133319673087type I restriction proteinQuickGO ontologyBLASTP
33319543332676723hypothetical proteinBLASTP
333267333358193147helicaseQuickGO ontologyBLASTP
33358373335995159hypothetical protein
333651633379071392integraseQuickGO ontologyBLASTP
33379193338113195excisionaseQuickGO ontologyBLASTP
333808933394561368replication initiation proteinQuickGO ontologyBLASTP
33395703339878309SpdD-like proteinQuickGO ontology
33398993340054156SpdC2 proteinQuickGO ontologyBLASTP
33400753340254180SpdB-like proteinQuickGO ontologyBLASTP
33402693341021753SpdA-like proteinQuickGO ontologyBLASTP
33410273341509483hypothetical protein
334159133429821392plasmid transfer proteinQuickGO ontologyBLASTP
33429883343335348regulatory proteinQuickGO ontologyBLASTP
33435353344356822hypothetical proteinBLASTP
33443533345213861hypothetical proteinBLASTP
33453893345784396hypothetical proteinBLASTP
33458833346713831regulatory proteinQuickGO ontologyBLASTP
334714733489251779restriction-modification system methyltransferaseQuickGO ontologyBLASTP