Pre_GI Gene

Host: NC_013929:3953046 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:3953046 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39530463954023978glycosyltransferaseQuickGO ontologyBLASTP
395402039553541335hypothetical proteinBLASTP
395535139565231173membrane-bound acyltransferaseQuickGO ontologyBLASTP
39567953957649855hypothetical proteinBLASTP
39578373958523687TetR family transcriptional regulatorQuickGO ontologyBLASTP
395859739600961500monooxygenaseQuickGO ontologyBLASTP
396022239612831062transposaseQuickGO ontologyBLASTP
39612803961933654LysE family transporterQuickGO ontologyBLASTP
39620653962988924hypothetical proteinBLASTP
396309339653242232GTPaseQuickGO ontologyBLASTP
396534239669221581methylmalonyl-CoA mutaseQuickGO ontologyBLASTP
39671373968072936peptidoglycan binding proteinQuickGO ontologyBLASTP
396835739696461290hypothetical protein
39696433970329687sigma factorQuickGO ontologyBLASTP
39706573971547891hypothetical protein
39715443972242699sigma factorQuickGO ontologyBLASTP
39723803972844465hypothetical protein
39729653973594630hypothetical protein
39736773974198522hypothetical protein
39742783974994717hypothetical proteinBLASTP
397543639770281593glycosylhydrolaseQuickGO ontologyBLASTP