Pre_GI Gene

Host: NC_013929:4549988 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:4549988 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
454847445499911518hypothetical proteinBLASTP
45499884550251264hypothetical protein
45512774551378102
45522254552485261hypothetical protein
45525034553342840hypothetical protein
455332945544111083hypothetical proteinBLASTP
4554555455462571tRNA-CysQuickGO ontology
455486245562381377transposaseQuickGO ontologyBLASTP
455738445583911008hypothetical protein
45587604559626867SAM-dependent methyltransferaseQuickGO ontologyBLASTP
455963245610801449cysteinyl-tRNA synthetaseQuickGO ontologyBLASTP
456116945622931125decarboxylaseQuickGO ontologyBLASTP
45622904563036747hypothetical proteinBLASTP
456303345641181086phosphotransferaseQuickGO ontology
45641424564756615thymidylate kinaseQuickGO ontologyBLASTP
45647604565614855asparaginyl-tRNA synthetaseQuickGO ontologyBLASTP
456728045692351956TraGTraD family proteinQuickGO ontologyBLASTP
45694894569710222hypothetical protein
45698044569986183hypothetical protein
457097845773856408ligand-binding proteinQuickGO ontologyBLASTP
457749545803742880hypothetical proteinBLASTP
45817494582003255hypothetical proteinBLASTP
45820034582422420hypothetical proteinBLASTP
458291745884545538hypothetical proteinBLASTP