Pre_GI Gene

Host: NC_013929:4807910 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:4807910 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
48079104808860951hypothetical proteinBLASTP
48091254809907783hypothetical protein
481003248112131182peptidaseQuickGO ontologyBLASTP
48116274812169543phosphoribosyltransferaseQuickGO ontologyBLASTP
48121664812741576deoxynucleotide triphosphate deaminaseQuickGO ontologyBLASTP
48129094813091183hypothetical proteinBLASTP
48137864814460675oxidoreductaseQuickGO ontologyBLASTP
48144574814696240hypothetical protein
481469348156971005zinc-binding dehydrogenaseQuickGO ontologyBLASTP
48161584817027870hydrolaseQuickGO ontologyBLASTP
48170854817657573TetR family transcriptional regulatorQuickGO ontologyBLASTP
48178214817961141
48181754818351177hypothetical protein
48195724820168597hypothetical proteinBLASTP
48205974820716120hypothetical protein
48207584821327570hypothetical proteinBLASTP
48218244822183360hypothetical proteinBLASTP
48221354822632498IS transposaseQuickGO ontologyBLASTP
48228554823115261hypothetical protein
482332548243261002hypothetical protein
48246254824753129
48247814825773993hypothetical proteinBLASTP
48257924826319528hypothetical protein
48263974827173777hypothetical proteinBLASTP