Pre_GI Gene

Host: NC_013929:8474195 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:8474195 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
84741958475163969lipoproteinQuickGO ontologyBLASTP
84753868476126741oxidoreductaseQuickGO ontologyBLASTP
84764608477062603hypothetical proteinBLASTP
84770598477241183hypothetical proteinBLASTP
84773428477467126BLASTP
84775258478250726hypothetical protein
847825484797891536hypothetical proteinBLASTP
84798998480759861hypothetical proteinBLASTP
848316784842251059two component sensor kinaseQuickGO ontologyBLASTP
84842648484992729two component positive transcriptional regulator PhoPQuickGO ontologyBLASTP
848523584875052271transporterQuickGO ontologyBLASTP
84876598487820162iron-sulfur proteinQuickGO ontologyBLASTP
84882758488913639hypothetical proteinBLASTP
84891668489609444acetaldehyde dehydrogenaseQuickGO ontologyBLASTP
848960684899503454-hydroxy-2-oxovalerate aldolaseQuickGO ontologyBLASTP
849051984918831365hypothetical proteinBLASTP
84919168492284369hypothetical proteinBLASTP
84922818493024744hypothetical proteinBLASTP
84931498493736588membrane transporterQuickGO ontologyBLASTP
84938498494139291hypothetical proteinBLASTP
84942858494716432DNA-binding proteinQuickGO ontologyBLASTP
849496984959761008LacI family transcriptional regulatorQuickGO ontologyBLASTP
849618784976051419beta-glucosidaseQuickGO ontologyBLASTP
84981468499069924oxidoreductaseQuickGO ontologyBLASTP
849930785014632157hypothetical proteinBLASTP
85015678501710144hypothetical protein
85027638503542780ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
850362385061332511ABC transporterQuickGO ontologyBLASTP
85065078507202696hypothetical proteinBLASTP
85075438508133591TetR family transcriptional regulatorQuickGO ontologyBLASTP
850827185092841014zinc-binding dehydrogenaseQuickGO ontologyBLASTP
85093598510270912acetyl-hydrolaseQuickGO ontologyBLASTP
85103478511069723short chain dehydrogenasereductaseQuickGO ontologyBLASTP
85117068512476771transposaseQuickGO ontologyBLASTP
85134358513938504BLASTP
85141988514863666virulence factor nec1QuickGO ontology
85152008515685486hypothetical proteinBLASTP