Pre_GI Gene

Host: NC_013941:2425233 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:2425233 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
24247822425252471Very short patch repair proteinQuickGO ontologyBLASTP
242523324266511419DNA-cytosine methyltransferaseQuickGO ontologyBLASTP
24267182427413696metal-dependent phosphohydrolaseQuickGO ontologyBLASTP
24274532427818366hypothetical proteinBLASTP
242838324295701188hypothetical proteinBLASTP
24296512430001351hypothetical proteinBLASTP
24301622431013852chaperone protein hchAQuickGO ontologyBLASTP
243112124324791359Heavy metal sensor histidine kinaseQuickGO ontologyBLASTP
24324792433261783Heavy metal response regulatorQuickGO ontologyBLASTP
24332832433696414transthyretin-like protein precursorQuickGO ontologyBLASTP
243380424348081005hypothetical proteinBLASTP
24348092435444636hypothetical proteinBLASTP
24357012436351651Ribulose-phosphate 3-epimerase precursorQuickGO ontologyBLASTP
24364612436610150hypothetical proteinBLASTP
24366642437224561cytochromeQuickGO ontologyBLASTP
24372482437490243hypothetical proteinBLASTP
24377942438153360hypothetical proteinBLASTP
24383612439014654hypothetical proteinBLASTP
24393392440211873Tir-cytoskeleton coupling proteinQuickGO ontologyBLASTP
244060824416361029Tail fiber proteinQuickGO ontologyBLASTP
24419872442586600enterobacterial AilLom family proteinQuickGO ontologyBLASTP
244265424461303477host specificity proteinQuickGO ontologyBLASTP
24458052446791987superoxide dismutaseQuickGO ontologyBLASTP
24468222447028207hypothetical protein
24475602448300741cell wall-associated hydrolases invasion-associated proteinsQuickGO ontologyBLASTP
24483062449004699hypothetical proteinBLASTP
24490042449333330tail component of prophage CP-933RQuickGO ontologyBLASTP
244933024519092580tail component of prophage CP-933OQuickGO ontologyBLASTP
24518902452303414phage tail assembly protein TQuickGO ontologyBLASTP
24523302452833504hypothetical proteinBLASTP
24527752453527753hypothetical proteinBLASTP
24535352453930396tail component of prophageQuickGO ontologyBLASTP
24539272454460534prophage minor tail protein ZQuickGO ontologyBLASTP
24544762454829354phage head-Tail AttachmentQuickGO ontologyBLASTP
24548222455205384hypothetical proteinBLASTP
245525724562851029phage major capsid protein EQuickGO ontologyBLASTP
24563432456690348bacteriophage lambda head decoration protein DQuickGO ontologyBLASTP
245672724582321506periplasmic serine proteases ClpP classQuickGO ontologyBLASTP
245822224598141593bacteriophage capsid proteinQuickGO ontologyBLASTP
24598112460017207head completion proteinQuickGO ontologyBLASTP
246000124619651965terminase large subunit of prophage CP-933OQuickGO ontologyBLASTP
24619012462410510prophage Qin DNA packaging protein NU1-like proteinQuickGO ontologyBLASTP