Pre_GI Gene

Host: NC_013941:3300000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:3300000 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
33000233300313291Ren proteinQuickGO ontologyBLASTP
33003103301011702P proteinQuickGO ontologyBLASTP
33010083301946939phage replication protein OQuickGO ontologyBLASTP
33019793302275297CII proteinQuickGO ontologyBLASTP
33023853302570186CroQuickGO ontologyBLASTP
33026513303301651P22 repressor protein c2QuickGO ontologyBLASTP
33035863303921336hypothetical proteinBLASTP
33039183304262345hypothetical proteinBLASTP
33043963304866471Gp45QuickGO ontologyBLASTP
33050163305384369Lambda prophage-derived protein ea10QuickGO ontologyBLASTP
33054573305621165Lambda phage regulatory protein CIIIQuickGO ontologyBLASTP
33055903305754165Kil protein of bacteriphage BP-933WQuickGO ontologyBLASTP
33061113306896786Recombination protein BetQuickGO ontologyBLASTP
33068933307573681exonuclease encoded by prophage CP-933KQuickGO ontologyBLASTP
33075643307752189hypothetical proteinBLASTP
33077253307916192hypothetical proteinBLASTP
33079273308208282hypothetical proteinBLASTP
33083073308528222C4-type zinc finger proteinQuickGO ontologyBLASTP
33085253309343819enterohemolysin 2QuickGO ontologyBLASTP
33093403309843504Valyl-tRNA synthetaseQuickGO ontologyBLASTP
33099313310173243hypothetical proteinBLASTP
33101773310323147bacteriophage proteinQuickGO ontologyBLASTP
331049633116801185hypothetical proteinBLASTP
33121733313096924hypothetical proteinBLASTP
331338733146161230phage integrase family proteinQuickGO ontologyBLASTP
331523933168701632hypothetical proteinBLASTP
33169393317553615hypothetical proteinBLASTP
33175503318521972hypothetical proteinBLASTP
331865633200441389hypothetical proteinBLASTP
33206303320818189prophage integraseQuickGO ontologyBLASTP
332101433222071194hypothetical proteinBLASTP
332284633251672322hypothetical proteinBLASTP
33263543326755402hypothetical proteinBLASTP
332676033279921233hypothetical proteinBLASTP
33283033329004702hypothetical proteinBLASTP
33290013329375375hypothetical proteinBLASTP
332945133306951245hypothetical proteinBLASTP
33310913331561471hypothetical proteinBLASTP
33316023332000399hypothetical proteinBLASTP
333200133336321632DNA-binding proteinQuickGO ontologyBLASTP
333362933349541326Site-specific recombinase phage integrase family proteinQuickGO ontologyBLASTP
333494433361491206site specific recombinaseQuickGO ontologyBLASTP
33364723336720249DNA binding proteinQuickGO ontologyBLASTP
33367783337629852hypothetical proteinBLASTP
33429933343136144DNA-invertase from prophage CP4-44QuickGO ontologyBLASTP
334359033449391350hypothetical proteinBLASTP
33454473345599153hypothetical proteinBLASTP
3345691334576676tRNA-MetQuickGO ontologyBLASTP
334632733485792253hypothetical proteinBLASTP
33489163349893978alpha amylase family proteinQuickGO ontologyBLASTP
334984733511811335hypothetical proteinBLASTP