Pre_GI Gene

Host: NC_014012:1421979 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014012:1421979 Shewanella violacea DSS12, complete genome

Host Lineage: Shewanella violacea; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella violacea DSS12 was isolated from mud, taken at a depth of 5110 m, from the Ryukyu Trench in the Philippine Sea. Shewanella violacea is psychrophilic and barophilic, with an optimum growth temperature and pressure of 8 degrees C and 30 MPa, respectively. This organism is able to grow at pressures from 0.1 MPa to 70Mpa, however, no growth occurs a temperatures above 20 degrees C.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14219791422086108hypothetical protein
14221801423097918transcriptional regulator LysR familyQuickGO ontologyBLASTP
14233491424206858GTP cyclohydrolase I family proteinQuickGO ontologyBLASTP
14242671424932666syd proteinQuickGO ontology
14249821425755774hypothetical proteinBLASTP
14257551426084330hypothetical protein
14261891426611423hypothetical proteinBLASTP
14266181426845228hypothetical proteinBLASTP
14270091427653645acetyltransferase GNAT familyQuickGO ontology
14281871428303117hypothetical protein
14287061428819114hypothetical protein
14291991430140942hypothetical protein
14302381430624387hypothetical protein
143062414316371014hypothetical protein
14318011432118318hypothetical proteinBLASTP
14320811432959879tRNA pseudouridine synthase CQuickGO ontologyBLASTP
14332421433706465flavodoxinQuickGO ontologyBLASTP
14338991434732834formyltetrahydrofolate deformylaseQuickGO ontologyBLASTP
14348031435147345hypothetical proteinBLASTP
14355301435874345hypothetical proteinBLASTP
143611614369408252345-tetrahydropyridine-26-dicarboxylate N-succinyltransferaseQuickGO ontologyBLASTP
143700814395872580protein-P-II uridylyltransferaseQuickGO ontologyBLASTP
14396791440476798methionine aminopeptidase type IQuickGO ontologyBLASTP
14408151441543729ribosomal protein S2QuickGO ontologyBLASTP
14416601442508849translation elongation factor TsQuickGO ontologyBLASTP
14425971443337741uridylate kinaseQuickGO ontologyBLASTP
14434361443993558ribosome recycling factorQuickGO ontologyBLASTP
14440731444867795undecaprenyl diphosphate synthaseQuickGO ontologyBLASTP