Pre_GI Gene

Host: NC_014220:2265882 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014220:2265882 Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome

Host Lineage: Syntrophothermus lipocalidus; Syntrophothermus; Syntrophomonadaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: anaerobic granular sludge, thermophilic; Temp: Thermophile; Temp: 55C. Syntrophothermus lipocalidus is an anaerobic, thermophilic, syntrophic, fatty-acid-oxidizing bacterium.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
226588222693403459DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
226939422728133420DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
22730792273252174hypothetical protein
22734382273818381ribosomal protein L7L12QuickGO ontologyBLASTP
22738532274377525ribosomal protein L10QuickGO ontologyBLASTP
22748622275563702ribosomal protein L1QuickGO ontologyBLASTP
22756172276039423ribosomal protein L11QuickGO ontologyBLASTP
22760892276676588NusG antitermination factorQuickGO ontologyBLASTP
22766912276918228preprotein translocase SecE subunitQuickGO ontologyBLASTP
22769762277221246ribosomal protein L33QuickGO ontologyBLASTP
2277328227740477tRNA-MetQuickGO ontologyBLASTP
2277429227750476tRNA-ThrQuickGO ontology
2277509227758476tRNA-MetQuickGO ontology
2277671227775585tRNA-TyrQuickGO ontologyBLASTP
2277769227784375tRNA-ThrQuickGO ontology
22779042278557654RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
22787682279283516protein of unknown function DUF901QuickGO ontologyBLASTP
22792802280032753RNA methyltransferase TrmH family group 3QuickGO ontologyBLASTP
22800162280816801thymidylate synthase flavin-dependentQuickGO ontologyBLASTP
22814852281940456ribonuclease IIIQuickGO ontologyBLASTP
228188522835041620cysteinyl-tRNA synthetaseQuickGO ontologyBLASTP
22834492284168720serine O-acetyltransferaseQuickGO ontologyBLASTP
228452622859801455glutamyl-tRNA synthetaseQuickGO ontologyBLASTP