Pre_GI Gene

Host: NC_014318:1537732 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014318:1537732 Amycolatopsis mediterranei U32 chromosome, complete genome

Host Lineage: Amycolatopsis mediterranei; Amycolatopsis; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Amycolatopsis mediterranei (strain U-32) is a Gram-positive bacterium used for industry-scale production of rifamycin, which plays a vital role in antimycobacterial therapy.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
15377321538340609TetR family transcriptional regulatorQuickGO ontologyBLASTP
15384771538800324transposase IS3IS911 family proteinQuickGO ontologyBLASTP
15388001539717918integrase catalytic subunitQuickGO ontologyBLASTP
15397751540167393hypothetical proteinBLASTP
15408421541339498hypothetical proteinBLASTP
15414071541916510TetR family transcriptional regulatorQuickGO ontologyBLASTP
15420831543000918hypothetical proteinBLASTP
15432091543634426hypothetical proteinBLASTP
15437451544242498ECF subfamily RNA polymerase sigma-24 factorQuickGO ontologyBLASTP
15442291545179951hypothetical protein
15458831546800918integrase catalytic subunitQuickGO ontologyBLASTP
15468001547123324transposase IS3IS911 family proteinQuickGO ontologyBLASTP
154805015507402691TPR repeat-containing proteinQuickGO ontologyBLASTP
15512681551690423MarR family transcriptional regulatorQuickGO ontologyBLASTP
155173015532921563carotenoid cleavage dioxygenaseQuickGO ontologyBLASTP
15536991554235537MarR family transcriptional regulatorQuickGO ontologyBLASTP
15543411554721381DoxX family proteinQuickGO ontologyBLASTP
15547741555715942NADPHquinone reductase and related Zn-dependent oxidoreductaseQuickGO ontologyBLASTP
15558111556239429hypothetical proteinBLASTP
15562671557151885extradiol ring-cleavage dioxygenase class III protein subunit BQuickGO ontologyBLASTP
15572881558223936hydroxymethylglutaryl-CoA lyaseQuickGO ontologyBLASTP
155822515598711647fatty-acyl-CoA synthaseQuickGO ontologyBLASTP
155986815615531686X-Pro dipeptidyl-peptidase-like proteinQuickGO ontologyBLASTP