Pre_GI Gene

Host: NC_015410:2351464 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015410:2351464 Pseudomonas mendocina NK-01 chromosome, complete genome

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
235146423525971134hypothetical protein
23526722352857186hypothetical protein
235287323547021830fis family GAF modulated sigma54 specific transcriptional regulatorQuickGO ontologyBLASTP
235496223560561095ABC transporter-like proteinQuickGO ontologyBLASTP
235605623571531098ABC transporter-like proteinQuickGO ontologyBLASTP
23571502358013864binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
23580222358822801binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
23588352359107273hypothetical proteinBLASTP
235915923609011743extracellular solute-binding proteinQuickGO ontologyBLASTP
23609622361816855bifunctional 510-methylene-tetrahydrofolate dehydrogenase510-methylene-tetrahydrofolate cyclohydrolaseQuickGO ontologyBLASTP
2362201236227373tRNA-HisQuickGO ontology
2362333236241482tRNA-LeuQuickGO ontologyBLASTP
236280623648001995acyltransferase 3QuickGO ontologyBLASTP
236489423660601167phage integraseQuickGO ontologyBLASTP
23662292366423195hypothetical protein
23664162366682267hypothetical proteinBLASTP
236667923679171239phosphoadenosine phosphosulfate reductaseQuickGO ontologyBLASTP
23679142368540627hypothetical proteinBLASTP
23685372368755219hypothetical protein
23687452368999255hypothetical proteinBLASTP
23690592370018960hypothetical protein
23700752370389315hypothetical protein
23703862371210825phage-like proteinQuickGO ontologyBLASTP
237141123742602850DNA primase-like proteinQuickGO ontologyBLASTP
23742662374514249hypothetical proteinBLASTP
23745882374866279hypothetical proteinBLASTP
23748632375171309transcriptional activator OgrdeltaQuickGO ontologyBLASTP
23751682375647480hypothetical proteinBLASTP
23756772375880204hypothetical proteinBLASTP
23759402376296357regulatory proteinQuickGO ontologyBLASTP
23763192376957639NAD-dependent DNA ligaseQuickGO ontologyBLASTP
23770252377306282hypothetical proteinBLASTP
23790302379518489hypothetical protein
23795402380166627hypothetical protein
23802812380712432protein MucAQuickGO ontologyBLASTP
238071223819711260ultraviolet light resistance protein BQuickGO ontologyBLASTP
23820522382237186hypothetical protein
23822862382705420hypothetical protein
238325323845151263phage late control gene D protein-like proteinQuickGO ontologyBLASTP
23845122384952441phage P2 GpU proteinQuickGO ontologyBLASTP
238495923875112553phage tail fiber proteinQuickGO ontologyBLASTP