Pre_GI Gene

Host: NC_015957:639774 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015957:639774 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6397746418912118hypothetical proteinBLASTP
6418936434611569hypothetical proteinBLASTP
643660643911252hypothetical proteinBLASTP
6441506452351086hypothetical proteinBLASTP
645263645649387hypothetical proteinBLASTP
645649645978330hypothetical proteinBLASTP
645975646271297hypothetical protein
646369646497129hypothetical protein
646967647683717GntR family transcriptional regulator with UTRA sensor domainQuickGO ontologyBLASTP
647742648563822type 11 methyltransferaseQuickGO ontologyBLASTP
6486176496781062hypothetical proteinBLASTP
650518650886369MerR family transcriptional regulatorQuickGO ontologyBLASTP
651035651370336Ethyl tert-butyl ether degradation EthDQuickGO ontologyBLASTP
6514996530101512glycoside hydrolase family proteinQuickGO ontologyBLASTP
653343653771429large conductance mechanosensitive channel proteinQuickGO ontologyBLASTP
6537986550181221amidohydrolase 2QuickGO ontologyBLASTP
655185656054870hypothetical proteinBLASTP
656308656799492hypothetical proteinBLASTP
656850657518669NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
6575436588201278amidohydrolase 3QuickGO ontologyBLASTP
65914465921673tRNA-ThrQuickGO ontologyBLASTP
65927765934973tRNA-MetQuickGO ontologyBLASTP
65943665960016550S ribosomal protein L33QuickGO ontologyBLASTP
659685660155471hypothetical proteinBLASTP
660152660589438MaoC domain-containing protein dehydrataseQuickGO ontologyBLASTP
6607546618091056UDP-N-acetylenolpyruvoylglucosamine reductaseQuickGO ontologyBLASTP
6618656628961032adenosine deaminaseQuickGO ontologyBLASTP
6630116642491239class I and II aminotransferaseQuickGO ontologyBLASTP
66443166450676tRNA-TrpQuickGO ontologyBLASTP
664671664904234preprotein translocase subunit SecEQuickGO ontologyBLASTP
664988665902915NusG antitermination factorQuickGO ontologyBLASTP
66606866650243550S ribosomal protein L11QuickGO ontologyBLASTP