Pre_GI Gene

Host: NC_015957:8845274 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015957:8845274 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
884527488462871014metal ion ABC transporter periplasmic subunitQuickGO ontologyBLASTP
88463178847213897ABC transporter-like proteinQuickGO ontologyBLASTP
88472158848087873ABC transporter integral membrane subunitQuickGO ontologyBLASTP
88482588848683426Fur family ferric uptake regulatorQuickGO ontologyBLASTP
884899588501641170major facilitator superfamily proteinQuickGO ontologyBLASTP
88502818850589309hypothetical protein
88506708851101432hypothetical protein
885110888553494242RHS repeat-associated core domain-containing proteinQuickGO ontologyBLASTP
88553468855741396hypothetical protein
88558148855978165BLASTP
88561308856411282hypothetical proteinBLASTP
88564358857118684hypothetical protein
88571748857767594bifunctional deaminase-reductase domain-containing proteinQuickGO ontologyBLASTP
88578398858417579regulatory protein TetRQuickGO ontologyBLASTP
88584928859328837Undecaprenyl pyrophosphate synthaseQuickGO ontologyBLASTP
88593808860138759DNA repair protein recOQuickGO ontologyBLASTP
88601458860348204hypothetical proteinBLASTP
88603658861210846putative DNA-binding proteinQuickGO ontologyBLASTP
88613848861812429regulatory proteinQuickGO ontologyBLASTP
886183788637651929hypothetical proteinBLASTP
88638398864147309transposase IS3IS911 family proteinQuickGO ontologyBLASTP
88641448865064921integrase catalytic subunitQuickGO ontologyBLASTP
88650658865601537NB-ARC domain-containing proteinQuickGO ontologyBLASTP
88655988866221624hypothetical proteinBLASTP
88662148866483270hypothetical proteinBLASTP
88666458866830186
886689888698762979carbohydrate binding family 6QuickGO ontologyBLASTP
88701928870395204hypothetical protein
88704668870996531MarR family transcriptional regulatorQuickGO ontologyBLASTP
88710568872006951amidohydrolase 2QuickGO ontologyBLASTP
88721278872600474alkylhydroperoxidase like proteinQuickGO ontologyBLASTP
88726798873044366MmcQ-like proteinQuickGO ontologyBLASTP
887400788753531347peptidase S8 and S53 subtilisin kexin sedolisinQuickGO ontologyBLASTP
88753658875616252hypothetical protein