Pre_GI Gene

Host: NC_016445:1363831 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016445:1363831 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
136383113668813051transporter AcrBDF familyQuickGO ontologyBLASTP
1367093136718088tRNA-SerQuickGO ontologyBLASTP
136749313687281236phage family integraseQuickGO ontologyBLASTP
13688241369279456phage integraseQuickGO ontologyBLASTP
136941013728593450hypothetical proteinBLASTP
137285013743011452hypothetical proteinBLASTP
13742981375032735chemotaxis protein MotB-related proteinQuickGO ontologyBLASTP
137502513771452121hypothetical proteinBLASTP
137719013802493060type I restriction enzyme R subunitQuickGO ontologyBLASTP
138028613822771992hypothetical proteinBLASTP
138227013836821413hypothetical proteinBLASTP
138368313850231341type I restriction enzyme S subunitQuickGO ontologyBLASTP
138502813874092382type I restriction enzyme M proteinQuickGO ontologyBLASTP
138755013896132064hypothetical proteinBLASTP
138959513931673573hypothetical proteinBLASTP
13932851394145861hypothetical proteinBLASTP
139421013952801071hypothetical proteinBLASTP
139529513964491155N-acetylneuraminic acid mutarotaseQuickGO ontologyBLASTP
13966311397446816sialic acid utilization regulator RpiR familyQuickGO ontologyBLASTP
13975961398492897N-acetylneuraminate lyaseQuickGO ontologyBLASTP
139853013998131284hypothetical proteinBLASTP
13998211400330510hypothetical proteinBLASTP
14003931401358966C4-dicarboxylate-binding periplasmic proteinQuickGO ontologyBLASTP
14015731402295723N-acylglucosamine-6-phosphate 2-epimeraseQuickGO ontologyBLASTP
14022831403146864N-acylmannosamine kinaseQuickGO ontologyBLASTP
140315014042861137N-acetylglucosamine-6-phosphate deacetylaseQuickGO ontologyBLASTP
140471014070552346neuraminidaseQuickGO ontologyBLASTP
14072021407378177transcriptional regulatorQuickGO ontologyBLASTP
14075221407998477DNA repair protein RadCQuickGO ontologyBLASTP
14079951408132138hypothetical proteinBLASTP
14082281408890663hypothetical proteinBLASTP
14089201409792873transposase OrfAB subunit BQuickGO ontologyBLASTP
14097891410097309transposase OrfAB subunit AQuickGO ontologyBLASTP
141014014111801041hypothetical proteinBLASTP
14113151411674360hypothetical proteinBLASTP
14117231412094372hypothetical proteinBLASTP
14121551412733579hypothetical proteinBLASTP
14127521413072321hypothetical proteinBLASTP
14130591413433375hypothetical proteinBLASTP
14138351414101267phage proteinQuickGO ontologyBLASTP
14142431414704462hypothetical proteinBLASTP
141470714158161110hypothetical proteinBLASTP
141578814175451758hypothetical proteinBLASTP
14175521418523972hypothetical proteinBLASTP
14185251418857333hypothetical proteinBLASTP
14188621419224363hypothetical proteinBLASTP
14195131419974462hypothetical proteinBLASTP
14202011420515315hypothetical proteinBLASTP
14205661421012447hypothetical proteinBLASTP
14211191422105987hypothetical proteinBLASTP
14221401422433294hypothetical proteinBLASTP
14225411422780240hypothetical proteinBLASTP
14230721423917846hypothetical proteinBLASTP