Pre_GI Gene

Host: NC_016582:1018014 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016582:1018014 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
101801410194411428gluconate transporterQuickGO ontologyBLASTP
10195291020515987putative tricarboxylic transport membrane proteinQuickGO ontologyBLASTP
102061410222871674two component system histidine kinaseQuickGO ontologyBLASTP
10222841022976693putative two component system response regulatorQuickGO ontologyBLASTP
102299810241221125hypothetical protein
10241331024369237hypothetical protein
102457510257111137hypothetical proteinBLASTP
1025965104336417400type I polyketide synthaseQuickGO ontologyBLASTP
10433781044370993MilCQuickGO ontologyBLASTP
104442910458081380cytochrome P450 hydroxylaseQuickGO ontologyBLASTP
1045885106094415060modular polyketide synthaseQuickGO ontologyBLASTP