Pre_GI Gene

Host: NC_016810:3923988 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016810:3923988 Salmonella enterica subsp. enterica serovar Typhimurium str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39239883924107120
392419639252211026threonine 3-dehydrogenaseQuickGO ontologyBLASTP
3925231392642711972-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
39266303927562933ADP-L-glycero-D-manno-heptose-6-epimeraseQuickGO ontologyBLASTP
392756539286111047ADP-heptose--LPS-heptosyltransferase IIQuickGO ontologyBLASTP
39286113929564954lipopolysaccharide heptosyltransferase-1QuickGO ontologyBLASTP
392960439308181215O-antigen ligaseQuickGO ontologyBLASTP
39308753931738864lipopolysaccharide 12-N-acetylglucosaminetransferaseQuickGO ontologyBLASTP
39321213932930810lipopolysaccharide core biosynthesis protein RfaZQuickGO ontologyBLASTP
39330803933634555lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
393380139348111011lipopolysaccharide 12-glucosyltransferaseQuickGO ontologyBLASTP
393482939358421014lipopolysaccharide 13-galactosyltransferaseQuickGO ontologyBLASTP
393584839369271080lipopolysaccharide 16-galactosyltransferaseQuickGO ontologyBLASTP
39369973937230234hypothetical proteinBLASTP
39372623938059798lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
393805239391761125lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
393917339402071035lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
3940718394192912123-deoxy-D-manno-octulosonic-acid transferaseQuickGO ontologyBLASTP
39419383942417480phosphopantetheine adenylyltransferaseQuickGO ontologyBLASTP
39424453943254810formamidopyrimidine-DNA glycosylaseQuickGO ontologyBLASTP
3943352394351916850S ribosomal protein L33QuickGO ontologyBLASTP
3943540394377623750S ribosomal protein L28QuickGO ontologyBLASTP
39439943944659666putative DNA repair proteinQuickGO ontologyBLASTP
394483239460551224hypothetical proteinBLASTP
39460363946491456deoxyuridine 5-triphosphate nucleotidohydrolaseQuickGO ontologyBLASTP
39465993947195597putative TetR family transcriptional regulatorQuickGO ontologyBLASTP
39472733947914642orotate phosphoribosyltransferaseQuickGO ontologyBLASTP
39479933948709717RNase PHQuickGO ontologyBLASTP