Pre_GI Gene

Host: NC_017186:7822448 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017186:7822448 Amycolatopsis mediterranei S699 chromosome, complete genome

Host Lineage: Amycolatopsis mediterranei; Amycolatopsis; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Amycolatopsis belongs to the actinomycete family Pseudonocardiaceae. Amycolatopsis mediterranei produces the antibiotic rifamycin, derivatives of which are used for curing tuberculosis and leprosy. Antibiotic producing bacterium.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
782244878237701323AmaHipOHyuC family hydrolaseQuickGO ontologyBLASTP
782386978248881020serine protease PepDQuickGO ontologyBLASTP
78250047825378375hypothetical proteinBLASTP
782544878269741527hypothetical proteinBLASTP
78271217827696576oligoribonucleaseQuickGO ontologyBLASTP
7827774782784976tRNA-HisQuickGO ontology
782820478294901287MFS transporter prolinebetaine transporterQuickGO ontologyBLASTP
782948778305301044Ykud domain-containing proteinQuickGO ontologyBLASTP
783086478325011638integrase family proteinQuickGO ontologyBLASTP
78326047832822219integraseresolvase-related proteinQuickGO ontologyBLASTP
78328197833625807adenine-specific DNA-methyltransferaseQuickGO ontologyBLASTP
78336227834002381site-specific DNA-methyltransferaseQuickGO ontologyBLASTP
783459578372882694hypothetical proteinBLASTP
78373037837707405hypothetical proteinBLASTP
78377047838126423hypothetical proteinBLASTP
78381237838494372hypothetical proteinBLASTP
78384947838688195hypothetical proteinBLASTP
78387027839553852type II secretion system proteinQuickGO ontologyBLASTP
78395507840401852type II secretion system proteinQuickGO ontologyBLASTP
784039878417501353pilus assembly protein CpaFtype II secretion system protein EQuickGO ontologyBLASTP
78417407842546807hypothetical proteinBLASTP
78425437843208666SAF domain-containing proteinQuickGO ontologyBLASTP
78432057843786582hypothetical proteinBLASTP