Pre_GI Gene

Host: NC_017214:658821 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017214:658821 Bifidobacterium animalis subsp. lactis BB-12 chromosome, complete

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
658235658837603Putative DNA binding proteinQuickGO ontologyBLASTP
658821659147327Alphabeta hydrolaseQuickGO ontologyBLASTP
6591866616872502excinuclease ABC subunit AQuickGO ontologyBLASTP
661947662801855MethyltransferaseQuickGO ontologyBLASTP
662850663764915hypothetical proteinBLASTP
664087664686600NADPH-dependent FMN reductase family proteinQuickGO ontologyBLASTP
664889665602714hypothetical proteinBLASTP
6656756667091035hypothetical proteinBLASTP
666744667019276hypothetical proteinBLASTP
667203667472270hypothetical proteinBLASTP
667610668014405Pyrophosphohydrolase MazG familyQuickGO ontologyBLASTP
667961668311351hypothetical proteinBLASTP
6683216694031083hypothetical proteinBLASTP
6700686716091542DNA-cytosine methyltransferaseQuickGO ontologyBLASTP
671704672657954hypothetical proteinBLASTP
672783672974192hypothetical proteinBLASTP
6730666755402475hypothetical proteinBLASTP
675568676188621hypothetical proteinBLASTP
6761306782652136hypothetical proteinBLASTP
6782926797341443hypothetical proteinBLASTP
679909680112204hypothetical proteinBLASTP
680376680606231YafQQuickGO ontologyBLASTP
680893681507615PemK-like proteinQuickGO ontologyBLASTP
681695682654960LysR family transcriptional regulatorQuickGO ontologyBLASTP
682582683013432hypothetical proteinBLASTP
68289568359069625-diketo-D-gluconic acid reductaseQuickGO ontologyBLASTP
6836826860662385Thermostable beta-glucosidase BQuickGO ontologyBLASTP
686145686591447Aminoglycoside 3-phosphotransferaseQuickGO ontologyBLASTP
686688686957270Aminoglycoside 3-phosphotransferaseQuickGO ontologyBLASTP
687133687627495hypothetical proteinBLASTP
6879576893001344transposaseQuickGO ontologyBLASTP