Pre_GI Gene

Host: NC_017219:1203500 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017219:1203500 Bifidobacterium longum subsp. infantis ATCC 15697, complete genome

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12035091204075567hypothetical proteinBLASTP
12041371204955819hypothetical proteinBLASTP
12049571205526570putative ribosomal-protein-alanine N-acetyltransferaseQuickGO ontologyBLASTP
120552312065661044metalloendopeptidaseQuickGO ontologyBLASTP
1206757120683276tRNA-AsnQuickGO ontologyBLASTP
12068671207019153hypothetical protein
12070581207426369putative phage integraseQuickGO ontologyBLASTP
12075901208519930hypothetical proteinBLASTP
12085221208650129hypothetical protein
12087421208978237hypothetical proteinBLASTP
120913612102601125hypothetical proteinBLASTP
12104711211280810putative transposaseQuickGO ontologyBLASTP
121133512126001266putative transposaseQuickGO ontologyBLASTP
12127101213093384hypothetical proteinBLASTP
12131161213835720hypothetical proteinBLASTP
12145921214948357hypothetical proteinBLASTP
121495812160941137hypothetical proteinBLASTP
121618912179881800putative ABC transporter ATP-binding and permease componentsQuickGO ontologyBLASTP
12180751218491417hypothetical proteinBLASTP
12187101218904195putative integraseQuickGO ontologyBLASTP
12189651219273309hypothetical proteinBLASTP
12194121219738327hypothetical proteinBLASTP
12197661219921156hypothetical proteinBLASTP
12201481220495348hypothetical proteinBLASTP
12206671220951285hypothetical proteinBLASTP
12213081221451144hypothetical protein
12215971221767171hypothetical protein
122181112229261116putative transposaseQuickGO ontologyBLASTP
12230141223550537hypothetical protein
12235581224070513hypothetical proteinBLASTP
122422812253221095ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
12253191226158840hypothetical proteinBLASTP
12261551227006852hypothetical proteinBLASTP
12270731227561489hypothetical proteinBLASTP
12275641227914351hypothetical proteinBLASTP
122803812293271290putative two-component sensor kinaseQuickGO ontologyBLASTP
12293321230003672putative two-component response regulatorQuickGO ontologyBLASTP