Pre_GI Gene

Host: NC_017249:5255967 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017249:5255967 Bradyrhizobium japonicum USDA 6, complete genome

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
52559675256803837hypothetical proteinBLASTP
52570845258022939hypothetical protein
52582045258734531hypothetical proteinBLASTP
52587355259316582hypothetical proteinBLASTP
52593095259491183hypothetical protein
52599965260274279hypothetical proteinBLASTP
52602625260726465hypothetical proteinBLASTP
52611465261322177hypothetical protein
526131952629081590hypothetical proteinBLASTP
52628835263149267hypothetical protein
52634515263654204cold shock proteinQuickGO ontologyBLASTP
52641215264510390hypothetical proteinBLASTP
52646345264867234hypothetical proteinBLASTP
52648675265289423hypothetical protein
52655265265759234hypothetical protein
52660885266684597hypothetical proteinBLASTP
52666845267265582hypothetical proteinBLASTP
52684695268834366hypothetical proteinBLASTP
52688355269035201hypothetical proteinBLASTP
52691235269398276hypothetical proteinBLASTP
5269567526965690tRNA-SerQuickGO ontologyBLASTP
52698605270132273hypothetical protein
52706335270923291hypothetical protein
527149952736072109hypothetical proteinBLASTP
527362652759052280hypothetical proteinBLASTP
52759025276318417hypothetical proteinBLASTP
52764805277454975hypothetical proteinBLASTP
527746552796722208hypothetical proteinBLASTP
52797045280351648hypothetical proteinBLASTP
52804715280662192hypothetical proteinBLASTP
52807215280945225hypothetical proteinBLASTP